User profiles for R. D. Dar

Roy Dar

Assistant Professor, University of Illinois at Urbana-Champaign, Dept. of Bioengineering
Verified email at illinois.edu
Cited by 2517

Transcriptional burst frequency and burst size are equally modulated across the human genome

RD Dar, BS Razooky, A Singh… - Proceedings of the …, 2012 - National Acad Sciences
Gene expression occurs either as an episodic process, characterized by pulsatile bursts, or
as a constitutive process, characterized by a Poisson-like accumulation of gene products. It …

Gene network shaping of inherent noise spectra

DW Austin, MS Allen, JM McCollum, RD Dar, JR Wilgus… - Nature, 2006 - nature.com
Recent work demonstrates that stochastic fluctuations in molecular populations have
consequences for gene regulation 1 , 2 , 3 , 4 , 5 , 6 , 7 , 8 , 9 , 10 . Previous experiments focused on …

Principles for the design of multicellular engineered living systems

…, M Sample, GA Truskey, J Zartman, RD Dar… - APL …, 2022 - pubs.aip.org
Remarkable progress in bioengineering over the past two decades has enabled the formulation
of fundamental design principles for a variety of medical and non-medical applications. …

BET bromodomain-targeting compounds reactivate HIV from latency via a Tat-independent mechanism

D Boehm, V Calvanese, RD Dar, S Xing, S Schroeder… - Cell cycle, 2013 - Taylor & Francis
The therapeutic potential of pharmacologic inhibition of bromodomain and extraterminal (BET)
proteins has recently emerged in hematological malignancies and chronic inflammation. …

Transient-mediated fate determination in a transcriptional circuit of HIV

LS Weinberger, RD Dar, ML Simpson - Nature genetics, 2008 - nature.com
Steady-state behavior and bistability have been proposed as mechanisms for decision making
in gene circuits 1 , 2 , 3 . However, transient gene expression has also been proposed to …

Screening for noise in gene expression identifies drug synergies

RD Dar, NN Hosmane, MR Arkin, RF Siliciano… - Science, 2014 - science.org
Stochastic fluctuations are inherent to gene expression and can drive cell-fate specification.
We used such fluctuations to modulate reactivation of HIV from latency—a quiescent state …

Noise in biological circuits

…, MS Allen, JM McCollum, RD Dar… - Wiley …, 2009 - Wiley Online Library
… Along these lines, Weinberger, Dar, and Simpson used measured noise correlation shifts
in HIV-1 transactivation circuits in human immune cells (Jurkat) to determine the strength of …

Perspective: The promise of multi-cellular engineered living systems

RD Kamm, R Bashir, N Arora, RD Dar, MU Gillette… - APL …, 2018 - pubs.aip.org
Recent technological breakthroughs in our ability to derive and differentiate induced
pluripotent stem cells, organoid biology, organ-on-chip assays, and 3-D bioprinting have all …

Dynamics of protein noise can distinguish between alternate sources of gene‐expression variability

A Singh, BS Razooky, RD Dar… - Molecular systems …, 2012 - embopress.org
Within individual cells, two molecular processes have been implicated as sources of noise
in gene expression: (i) Poisson fluctuations in mRNA abundance arising from random birth …

[PDF][PDF] A post-transcriptional feedback mechanism for noise suppression and fate stabilization

…, E Ingerman, BS Razooky, CE Thompson, RD Dar… - Cell, 2018 - cell.com
Diverse biological systems utilize fluctuations ("noise") in gene expression to drive lineage-commitment
decisions. However, once a commitment is made, noise becomes detrimental to …