User profiles for R. Neme
Rafik NemeAssistant Professor, Departamento de Química y Biología, Universidad del Norte … Verified email at uninorte.edu.co Cited by 1372 |
[HTML][HTML] Phylogenetic patterns of emergence of new genes support a model of frequent de novoevolution
… Rafik Neme … Other statistical tests were perfomed using R version 2.15.1 [57] and PASW
version … Khalturin K, Hemmrich G, Fraune S, Augustin R, Bosch TCG: More than just orphans: …
version … Khalturin K, Hemmrich G, Fraune S, Augustin R, Bosch TCG: More than just orphans: …
[HTML][HTML] The Gonium pectorale genome demonstrates co-option of cell cycle regulation during the evolution of multicellularity
The transition to multicellularity has occurred numerous times in all domains of life, yet its
initial steps are poorly understood. The volvocine green algae are a tractable system for …
initial steps are poorly understood. The volvocine green algae are a tractable system for …
Young genes are highly disordered as predicted by the preadaptation hypothesis of de novo gene birth
… R. Carvunis, personal communication) to reproduce the classification presented in ref. 3. …
Cordes for discussions, R. Bakaric for assistance with phylostratigraphy and A.-R. Carvunis for …
Cordes for discussions, R. Bakaric for assistance with phylostratigraphy and A.-R. Carvunis for …
[HTML][HTML] Genomic resources for wild populations of the house mouse, Mus musculus and its close relative Mus spretus
Wild populations of the house mouse (Mus musculus) represent the raw genetic material for
the classical inbred strains in biomedical research and are a major model system for …
the classical inbred strains in biomedical research and are a major model system for …
Fast turnover of genome transcription across evolutionary time exposes entire non-coding DNA to de novo gene emergence
10.7554/eLife.09977.001 Deep sequencing analyses have shown that a large fraction of
genomes is transcribed, but the significance of this transcription is much debated. Here, we …
genomes is transcribed, but the significance of this transcription is much debated. Here, we …
No evidence for phylostratigraphic bias impacting inferences on patterns of gene emergence and evolution
Phylostratigraphy is a computational framework for dating the emergence of DNA and protein
sequences in a phylogeny. It has been extensively applied to make inferences on patterns …
sequences in a phylogeny. It has been extensively applied to make inferences on patterns …
Random sequences are an abundant source of bioactive RNAs or peptides
R Neme, C Amador, B Yildirim, E McConnell… - Nature ecology & …, 2017 - nature.com
… Still, minor differences are found for some comparisons in the relative frequency of certain
amino acids, such as less R, D, C, G… The analysis was done using the R package DESeq2 15 . …
amino acids, such as less R, D, C, G… The analysis was done using the R package DESeq2 15 . …
Tracing the dynamics of gene transcripts after organismal death
AE Pozhitkov, R Neme, T Domazet-Lošo… - Open …, 2017 - royalsocietypublishing.org
… model best fit the dilution curve with R 2 = 0.99. The equation for this probe is the following:
… well the experimental data fits to the calibration (ie R 2 ). In the Gene Meter approach, the …
… well the experimental data fits to the calibration (ie R 2 ). In the Gene Meter approach, the …
Histological classification of endometriosis as a predictor of response to treatment
MS Abrao, RM Neme, FM Carvalho, JM Aldrighi… - International Journal of …, 2003 - Elsevier
Objectives: To evaluate the usefulness of the histological classification of endometriosis in
predicting responses to treatment. Methods: We evaluated 412 biopsy specimens from 241 …
predicting responses to treatment. Methods: We evaluated 412 biopsy specimens from 241 …
Robot-assisted laparoscopy for deep infiltrating endometriosis: international multicentric retrospective study
P Collinet, P Leguevaque, RM Neme, V Cela… - Surgical …, 2014 - Springer
Background This study aimed to assess the interest in robot-assisted laparoscopy for deep
infiltrating endometriosis and to investigate the perioperative results. Methods From …
infiltrating endometriosis and to investigate the perioperative results. Methods From …