User profiles for S. Ahsanuddin

Sofia Ahsanuddin

Stanford University
Verified email at stanford.edu
Cited by 1135

[PDF][PDF] A global metagenomic map of urban microbiomes and antimicrobial resistance

D Danko, D Bezdan, EE Afshin, S Ahsanuddin… - Cell, 2021 - cell.com
We present a global atlas of 4,728 metagenomic samples from mass-transit systems in 60
cities over 3 years, representing the first systematic, worldwide catalog of the urban microbial …

[PDF][PDF] Geospatial resolution of human and bacterial diversity with city-scale metagenomics

…, D Reeves, J Gandara, S Chhangawala, S Ahsanuddin… - Cell systems, 2015 - cell.com
… To determine whether the marine signature of the South Ferry Station was a consequence
of being coated in NYC’s waterways during the hurricane, we compared these data to 12 sites …

[HTML][HTML] Comprehensive benchmarking and ensemble approaches for metagenomic classifiers

…, SS Minot, D Danko, J Foox, S Ahsanuddin, S Tighe… - Genome biology, 2017 - Springer
… We ran CLARK and CLARK-S. CLARK is up to two orders of magnitude faster than CLARK-S
but the latter is capable of assigning more reads with higher accuracy at the phylum/genus …

[HTML][HTML] Single-cell transcriptomics of the ocular anterior segment: a comprehensive review

S Ahsanuddin, AY Wu - Eye, 2023 - nature.com
… Because it lacks individual cell-type resolution, pooled RNA-seq analyses also cannot
provide insight into each cell type’s relative abundance and how gene expression differs by cell …

[HTML][HTML] Oral vitamin D rapidly attenuates inflammation from sunburn: an interventional study

JF Scott, LM Das, S Ahsanuddin, Y Qiu… - Journal of investigative …, 2017 - Elsevier
… Exploratory analyses suggest that the host’s response to vitamin D 3 intervention plays a
critical role in the modulation of inflammation. Participants segregated into two clusters based …

Adverse events associated with botox as reported in a food and drug administration database

S Ahsanuddin, S Roy, W Nasser, R Povolotskiy… - Aesthetic Plastic …, 2021 - Springer
… Thus, while one may be the prototypic drug, it is important for all three formulations to be
available to the physician in determining which is best suited for each patient’s individual needs…

[HTML][HTML] Genomic methods and microbiological technologies for profiling novel and extreme environments for the extreme microbiome project (XMP)

…, N Alexander, A McIntyre, S Ahsanuddin… - Journal of …, 2017 - ncbi.nlm.nih.gov
… The authors thank Europlanet 2020 RI from the European Union’s Horizon 2020 research
and innovation programme, under grant agreement No 654208 funded Danakil work, for the …

When to Nuss? patient age as a risk factor for complications of minimally invasive repair of pectus excavatum: a systematic review and meta-analysis

AC Coughlin, S Ahsanuddin, D Inglesby, C Fox… - Pediatric Surgery …, 2022 - Springer
Purpose The optimal age for minimally invasive repair of pectus excavatum (MIRPE) is unclear;
this study investigates the differences in complication rates among different age groups …

[HTML][HTML] Precision metagenomics: rapid metagenomic analyses for infectious disease diagnostics and public health surveillance

…, C Chou, N Alexander, S Ahsanuddin… - Journal of …, 2017 - ncbi.nlm.nih.gov
… , as well as guarantee that the patient’s privacy and genomic rights are respected. One of …
s infection or be appropriated for epidemiologic purposes. Indeed, just as the human genome’s

Otolaryngologic side effects after COVID‐19 vaccination

S Ahsanuddin, R Jin, AK Dhanda, K Georges… - The …, 2024 - Wiley Online Library
Objectives With widespread vaccination against COVID‐19, concerns regarding side effects
have been raised. We aim to assess the frequency of otolaryngologic adverse events (AEs) …