User profiles for T. Aittokallio
Tero AittokallioUniversity of Helsinki, University of Turku, University of Oslo Verified email at utu.fi Cited by 16184 |
Graph-based methods for analysing networks in cell biology
T Aittokallio, B Schwikowski - Briefings in bioinformatics, 2006 - academic.oup.com
… Tero Aittokallio Tero Aittokallio is a postdoctoral researcher in the Systems Biology Group
at Institut Pasteur. His research interests include mathematical modelling and machine …
at Institut Pasteur. His research interests include mathematical modelling and machine …
Network pharmacology applications to map the unexplored target space and therapeutic potential of natural products
… Dr Aittokallio then launched his independent career as a principal investigator in the
Turku Biomathematics Research Group in 2007, and received a five-year appointment as an …
Turku Biomathematics Research Group in 2007, and received a five-year appointment as an …
Dealing with missing values in large-scale studies: microarray data imputation and beyond
T Aittokallio - Briefings in bioinformatics, 2010 - academic.oup.com
High-throughput biotechnologies, such as gene expression microarrays or mass-spectrometry-based
proteomic assays, suffer from frequent missing values due to various experimental …
proteomic assays, suffer from frequent missing values due to various experimental …
A community effort to assess and improve drug sensitivity prediction algorithms
Predicting the best treatment strategy from genomic information is a core goal of precision
medicine. Here we focus on predicting drug response based on a cohort of genomic, …
medicine. Here we focus on predicting drug response based on a cohort of genomic, …
SynergyFinder 2.0: visual analytics of multi-drug combination synergies
… Tang was earlier a postdoc in the Aittokallio group, where the SynergyFinder tool is being
developed. Subsequently, Dr. Tang established his own group, and started promoting his own …
developed. Subsequently, Dr. Tang established his own group, and started promoting his own …
SynergyFinder 3.0: an interactive analysis and consensus interpretation of multi-drug synergies across multiple samples
SynergyFinder ( https://synergyfinder.fimm.fi ) is a free web-application for interactive analysis
and visualization of multi-drug combination response data. Since its first release in 2017, …
and visualization of multi-drug combination response data. Since its first release in 2017, …
Individualized systems medicine strategy to tailor treatments for patients with chemorefractory acute myeloid leukemia
…, L Turunen, I Västrik, M Wolf, J Knowles, T Aittokallio… - Cancer discovery, 2013 - AACR
We present an individualized systems medicine (ISM) approach to optimize cancer drug
therapies one patient at a time. ISM is based on (i) molecular profiling and ex vivo drug …
therapies one patient at a time. ISM is based on (i) molecular profiling and ex vivo drug …
[HTML][HTML] Searching for drug synergy in complex dose–response landscapes using an interaction potency model
Rational design of multi-targeted drug combinations is a promising strategy to tackle the drug
resistance problem for many complex disorders. A drug combination is usually classified …
resistance problem for many complex disorders. A drug combination is usually classified …
Toward more realistic drug–target interaction predictions
…, A Szwajda, J Tang, T Aittokallio - Briefings in …, 2015 - academic.oup.com
… and x t are encountered in the training set: x d forumla D and x t … We have seen x t forumla
T, but the drug x d is unseen in the … We have seen x d forumla D, but the target x t is unseen in …
T, but the drug x d is unseen in the … We have seen x d forumla D, but the target x t is unseen in …
SynergyFinder: a web application for analyzing drug combination dose–response matrix data
Rational design of drug combinations has become a promising strategy to tackle the drug
sensitivity and resistance problem in cancer treatment. To systematically evaluate the pre-…
sensitivity and resistance problem in cancer treatment. To systematically evaluate the pre-…