User profiles for T. Lionnet

timothée lionnet

Assistant Professor - Institute for Systems Genetics (NYU School of Medicine)
Verified email at nyumc.org
Cited by 6786

Single-molecule micromanipulation techniques

KC Neuman, T Lionnet, JF Allemand - Annu. Rev. Mater. Res., 2007 - annualreviews.org
… Fundamentally, a particle can be stably trapped if the depth of the optically induced
potential is significantly greater than k B T, which at room temperature (290 K) is convenient to …

Modern fluorescent proteins and imaging technologies to study gene expression, nuclear localization, and dynamics

B Wu, KD Piatkevich, T Lionnet, RH Singer… - Current opinion in cell …, 2011 - Elsevier
Recent developments in reagent design can address problems in single cells that were not
previously approachable. We have attempted to foresee what will become possible, and the …

Imaging transcription in living cells

…, V De Turris, VM Ruda, T Lionnet… - Annual review of …, 2009 - annualreviews.org
… A fast mobile component showed that ∼75% of the molecules were diffusing freely and the
immobile component showed that ∼25% of the molecules were transiently immobile with a t

Real-time quantification of single RNA translation dynamics in living cells

…, JB Grimm, S Viswanathan, LL Looger, T Lionnet… - Science, 2016 - science.org
Although messenger RNA (mRNA) translation is a fundamental biological process, it has
never been imaged in real time in vivo with single-molecule precision. To achieve this, we …

Bright photoactivatable fluorophores for single-molecule imaging

…, TA Brown, J Lippincott-Schwartz, Z Liu, T Lionnet… - Nature …, 2016 - nature.com
… (t–v) Analysis of blinking behavior of PA-JF 549 during PALM of ensconsin–HaloTag shown
in r. (t) Histogram of the duration of individual blinking events (magenta), overlaid with the fit …

A general method to improve fluorophores for live-cell and single-molecule microscopy

…, JJ Macklin, D Normanno, RH Singer, T Lionnet… - Nature …, 2015 - nature.com
Specific labeling of biomolecules with bright fluorophores is the keystone of fluorescence
microscopy. Genetically encoded self-labeling tag proteins can be coupled to synthetic dyes …

[HTML][HTML] Single-molecule dynamics of enhanceosome assembly in embryonic stem cells

…, A Revyakin, B Hajj, W Legant, M Dahan, T Lionnet… - Cell, 2014 - cell.com
Enhancer-binding pluripotency regulators (Sox2 and Oct4) play a seminal role in embryonic
stem (ES) cell-specific gene regulation. Here, we combine in vivo and in vitro single-…

A transgenic mouse for in vivo detection of endogenous labeled mRNA

T Lionnet, K Czaplinski, X Darzacq, Y Shav-Tal… - Nature …, 2011 - nature.com
Live-cell single mRNA imaging is a powerful tool but has been restricted in higher eukaryotes
to artificial cell lines and reporter genes. We describe an approach that enables live-cell …

RNA Polymerase II cluster dynamics predict mRNA output in living cells

…, W Conway, JB Grimm, JH Spille, LD Lavis, T Lionnet… - elife, 2016 - elifesciences.org
… We plotted the average Pol II cluster lifetime (at time t) against the number of nascent mRNA
subsequently transcribed (at time t+Dt). For the data comprising the b-actin gene response …

CASFISH: CRISPR/Cas9-mediated in situ labeling of genomic loci in fixed cells

W Deng, X Shi, R Tjian, T Lionnet… - Proceedings of the …, 2015 - National Acad Sciences
Direct visualization of genomic loci in the 3D nucleus is important for understanding the spatial
organization of the genome and its association with gene expression. Various DNA FISH …