Archive

ChromVAR: Inferring transcription factor variation from single-cell epigenomic data
Alicia N. Schep, Beijing Wu, Jason D. Buenrostro, William J. Greenleaf

bioRxiv 110346; doi: https://doi.org/10.1101/110346
Boron Hyperaccumulation Mechanisms in Puccinellia distans as Revealed by Transcriptomic Analysis
Saniye Elvan Öztürk, Mehmet Göktay, Canan Has, Mehmet Babaoğlu, Jens Allmer, Sami Doğanlar, Anne Frary

bioRxiv 110403; doi: https://doi.org/10.1101/110403
IcyTree: Rapid browser-based visualization for phylogenetic trees and networks
Timothy G. Vaughan

bioRxiv 110213; doi: https://doi.org/10.1101/110213
Genome-wide protein phylogenies for four African cichlid species
Ajay Ramakrishnan Varadarajan, Rohini Mopuri, J. Todd Streelman, Patrick T. McGrath

bioRxiv 110510; doi: https://doi.org/10.1101/110510
Histone H3 Lysine 4 methyltransferases MLL3 and MLL4 Modulate Long-range Chromatin Interactions at Enhancers
Jian Yan, Shi-An A Chen, Andrea Local, Tristin Liu, Yunjiang Qiu, Ah Young Lee, Inkyung Jung, Sebastian Preißl, Chloe M Rivera, Chaochen Wang, Haruhiko Ishii, Rongxin Fang, Zhen Ye, Kai Ge, Ming Hu, Bing Ren

bioRxiv 110239; doi: https://doi.org/10.1101/110239
The house spider genome reveals an ancient whole-genome duplication during arachnid evolution
Evelyn E. Schwager, Prashant P. Sharma, Thomas Clarke, Daniel J. Leite, Torsten Wierschin, Matthias Pechmann, Yasuko Akiyama-Oda, Lauren Esposito, Jesper Bechsgaard, Trine Bilde, Alexandra D. Buffry, Hsu Chao, Huyen Dinh, HarshaVardhan Doddapaneni, Shannon Dugan, Cornelius Eibner, Cassandra G. Extavour, Peter Funch, Jessica Garb, Luis B. Gonzalez, Vanessa L. Gonzalez, Sam Griffiths-Jones, Yi Han, Cheryl Hayashi, Maarten Hilbrant, Daniel S.T. Hughes, Ralf Janssen, Sandra L. Lee, Ignacio Maeso, Shwetha C. Murali, Donna M. Muzny, Rodrigo Nunes da Fonseca, Christian L. B. Paese, Jiaxin Qu, Matthew Ronshaugen, Christoph Schomburg, Anna Schönauer, Angelika Stollewerk, Montserrat Torres-Oliva, Natascha Turetzek, Bram Vanthournout, John H. Werren, Carsten Wolff, Kim C. Worley, Gregor Bucher, Richard A. Gibbs, Jonathan Coddington, Hiroki Oda, Mario Stanke, Nadia A. Ayoub, Nikola-Michael Prpic, Jean-Frangois Flot, Nico Posnien, Stephen Richards, Alistair P. McGregor

bioRxiv 106385; doi: https://doi.org/10.1101/106385
Mass spectrometrists should search for all peptides, but assess only the ones they care about
Adriaan Sticker, Lennart Martens, Lieven Clement

bioRxiv 094581; doi: https://doi.org/10.1101/094581
Global Proteomic Analyses of Macrophage Response to Mycobacterium tuberculosis Infection
Valérie Poirier, Gal Av-Gay, Yossef Av-Gay

bioRxiv 110304; doi: https://doi.org/10.1101/110304
Metabarcoding of unfractionated water samples relates phyto-, zoo- and bacterioplankton dynamics and reveals a single-taxon bacterial bloom
Christian Wurzbacher, Katrin Attermeyer, Marie Therese Kettner, Clara Flintrop, Norman Warthmann, Sabine Hilt, Hans-Peter Grossart, Michael T. Monaghan

bioRxiv 058628; doi: https://doi.org/10.1101/058628
A novel method for single whitefly (Bemisia tabaci) transcriptomes reveals an eleven amino acid deletion in the NusG protein in the bacterial endosymbiont Portiera aleyrodidaru
P. Sseruwagi, J. M. Wainaina, J. Ndunguru, R. Tumuhimbise, F. Tairo, J. Guo, A. Vrielink, A. Blythe, T. Kinene, B. De Marchi, M.A. Kehoe, S.K. Tanz, L.M. Boykin

bioRxiv 110353; doi: https://doi.org/10.1101/110353

Pages