Bioengineering

CyclicCAE: A Conformational Autoencoder for Efficient Heterochiral Macrocyclic Backbone Sampling
Andrew C. Powers, P. Douglas Renfrew, Parisa Hosseinzadeh, Vikram Khipple Mulligan

bioRxiv 2025.02.21.639569; doi: https://doi.org/10.1101/2025.02.21.639569 New Results

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Detection of inertial effects in capillary flows in open and closed channels
Jean Berthier, Jodie C. Tokihiro, Anika McManamen, TJ Caira, Albert Shin, Jing J. Lee, Ashleigh B. Theberge, Erwin Berthier

bioRxiv 2025.02.24.639324; doi: https://doi.org/10.1101/2025.02.24.639324 New Results

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3D Bioprinting of Kidney Tissue Using a Photocrosslinkable Hydrogel Derived from Decellularized Extracellular Matrix
Jaemyung Shin, Nima Tabatabaei Rezaei, Subin Choi, Keekyoung Kim

bioRxiv 2025.02.21.639595; doi: https://doi.org/10.1101/2025.02.21.639595 New Results

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Matrix tropism influences endometriotic cell attachment patterns
Hannah S. Theriault, Hannah R.C. Kimmel, Alison C. Nunes, Allison Paxhia, Sarah Hashim, Kathryn B.H. Clancy, Gregory H. Underhill, Brendan A.C. Harley

bioRxiv 2025.02.22.639314; doi: https://doi.org/10.1101/2025.02.22.639314 New Results

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Replacing fish meal with untreated and enzymatically treated torula yeast (Cyberlindnera jadinii) affects pelleting die flow resistance and physical properties of the feed pellets
Dejan Dragan Miladinovic, Carlos Salas-Bringas, Esther Julius Mbuto, Pashupati Suwal, Odd Ivar Lekang

bioRxiv 2025.02.21.639432; doi: https://doi.org/10.1101/2025.02.21.639432 New Results

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Advancing Cardiac Graft Assessment Methods During Normothermic Machine Perfusion to Achieve Improved Transplantation Outcomes
Emmanuella O. Ajenu, Manuela Lopera Higuita, Maya Bolger-Chen, George Olverson, Khanh T. Nguyen, Gurjit Singh, Padraic Romfh, Doug Vincent, S. Alireza Rabi, Asishana A. Osho, Shannon N. Tessier

bioRxiv 2025.02.20.639392; doi: https://doi.org/10.1101/2025.02.20.639392 New Results

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Color-neutral and reversible tissue transparency enables longitudinal deep-tissue imaging in live mice
Carl H.C. Keck, Elizabeth L. Schmidt, Richard H. Roth, Brendan M. Floyd, Andy P. Tsai, Hassler B. Garcia, Miao Cui, Xiaoyu Chen, Chonghe Wang, Andrew Park, Su Zhao, Pinyu A. Liao, Kerriann M. Casey, Wencke Reineking, Sa Cai, Ling-Yi Zhang, Qianru Yang, Lei Yuan, Ani Baghdasaryan, Eduardo R. Lopez, Lauren Cooper, Han Cui, Daniel Esquivel, Kenneth Brinson, Xiaoke Chen, Tony Wyss-Coray, Todd P. Coleman, Mark L. Brongersma, Carolyn R. Bertozzi, Gordon X. Wang, Jun B. Ding, Guosong Hong

bioRxiv 2025.02.20.639185; doi: https://doi.org/10.1101/2025.02.20.639185 New Results

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SleepSatelightFTC: A Lightweight and Interpretable Deep Learning Model for Single-Channel EEG-Based Sleep Stage Classification
Aozora Ito, Toshihisa Tanaka

bioRxiv 2024.08.02.606301; doi: https://doi.org/10.1101/2024.08.02.606301 New Results

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Precision in Spinal Cord Injury Research: A Novel Electromagnetic Impactor for a Consistent Porcine Model
Leonard Steger, Constantin Smit, Kayla Robinson, Kelley M. Kempski Leadingham, Daniel Davidar, Denis Routkevitch, Carly Weber-Levine, Kelly Jiang, Victor Quiroz, Stuart Bauer, Ruixing Liang, Ian Suk, Betty Tyler, Joshua C. Doloff, Nicholas Theodore, Amir Manbachi

bioRxiv 2025.02.25.639133; doi: https://doi.org/10.1101/2025.02.25.639133 New Results

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Measurement of residual stress in the brain
Ramin Balouchzadeh, Christopher D. Kroenke, Kara E. Garcia, Philip V. Bayly

bioRxiv 2025.02.26.637925; doi: https://doi.org/10.1101/2025.02.26.637925 Confirmatory Results

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Bioengineering

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