Bioinformatics

Correcting index databases improves metagenomic studies
Guillaume Meric, Ryan R Wick, Stephen C Watts, Kathryn E Holt, Michael Inouye

bioRxiv 712166; doi: https://doi.org/10.1101/712166 New Results

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Optimal choice of parameters in functional connectome-based predictive modelling might be biased by motion: comment on Dadi et al.
Tamas Spisak, Balint Kincses, Ulrike Bingel

bioRxiv 710731; doi: https://doi.org/10.1101/710731 Contradictory Results

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Detecting regions of differential abundance between scRNA-Seq datasets
Jun Zhao, Ariel Jaffe, Xiuyuan Cheng, Richard Flavell, Yuval Kluger

bioRxiv 711929; doi: https://doi.org/10.1101/711929 New Results

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PgRC: Pseudogenome based Read Compressor
Tomasz Kowalski, Szymon Grabowski

bioRxiv 710822; doi: https://doi.org/10.1101/710822 New Results

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Sequence alignment using machine learning for accurate template-based protein structure prediction
Shuichiro Makigaki, Takashi Ishida

bioRxiv 711945; doi: https://doi.org/10.1101/711945 New Results

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Minor QTLs mining through the combination of GWAS and machine learning feature selection
Xiuzhen Huang, Wei Zhou, Emily S. Bellis, Jonathan Stubblefield, Jason Causey, Jake Qualls, Karl Walker

bioRxiv 712190; doi: https://doi.org/10.1101/712190 New Results

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Evaluation of Model Fit of Inferred Admixture Proportions
Genís Garcia-Erill, Anders Albrechtsen

bioRxiv 708883; doi: https://doi.org/10.1101/708883 New Results

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Modelling of pH-dependence to develop a strategy for stabilising mAbs at acidic steps in production
Max Hebditch, Ryan Kean, Jim Warwicker

bioRxiv 711416; doi: https://doi.org/10.1101/711416 New Results

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Dirichlet-multinomial modelling outperforms alternatives for analysis of microbiome and other ecological count data
Joshua Harrison, W. John Calder, Vivaswat Shastry, C. Alex Buerkle

bioRxiv 711317; doi: https://doi.org/10.1101/711317 New Results

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Enzyme annotation in UniProtKB using Rhea
Anne Morgat, Thierry Lombardot, Elisabeth Coudert, Kristian Axelsen, Teresa B. Neto, Sebastien Gehant, Parit Bansal, Jerven Bolleman, Elisabeth Gasteiger, Edouard de Castro, Delphine Baratin, Monica Pozzato, Ioannis Xenarios, Sylvain Poux, Nicole Redaschi, Alan Bridge, The UniProt Consortium

bioRxiv 709899; doi: https://doi.org/10.1101/709899 New Results

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Bioinformatics

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