Bioinformatics

The response to selection in Glycoside Hydrolase Family 13 structures: A comparative quantitative genetics approach
Jose Sergio Hleap, Christian Blouin

bioRxiv 205542; doi: https://doi.org/10.1101/205542 New Results
MatchMiner: An open source computational platform for real-time matching of cancer patients to precision medicine clinical trials using genomic and clinical criteria
James Lindsay, Catherine Del Vecchio Fitz, Zachary Zwiesler, Priti Kumari, Bernd Van Der Veen, Tamba Monrose, Tali Mazor, Susan Barry, Adem Albayrak, Michael Tung, Khanh Do, Suzanne Hector-Barry, Brian Beardslee, Geoffrey Shapiro, John Methot, Lynette Sholl, Laura E. MacConaill, Neil Lindeman, Bruce Johnson, Barrett Rollins, Chris Sander, Michael Hassett, Ethan Cerami

bioRxiv 199489; doi: https://doi.org/10.1101/199489 New Results
A machine learning approach to predicting short-term mortality risk in patients starting chemotherapy
Aymen Elfiky, Maximilian Pany, Ravi Parikh, Ziad Obermeyer

bioRxiv 204081; doi: https://doi.org/10.1101/204081 New Results
Cluster Headache: Comparing Clustering Tools for 10X Single Cell Sequencing Data
Saskia Freytag, Ingrid Lonnstedt, Milica Ng, Melanie Bahlo

bioRxiv 203752; doi: https://doi.org/10.1101/203752 New Results
Modeling Codon Rate Variation: Robust Inference of Protein and Nucleotide Selection
Iakov I. Davydov, Nicolas Salamin, Marc Robinson-Rechavi

bioRxiv 174839; doi: https://doi.org/10.1101/174839 New Results
Juicebox.js provides a cloud-based visualization system for Hi-C data
James Robinson, Douglass Turner, Neva C. Durand, Helga Thorvaldsdottir, Jill P. Mesirov, Erez Lieberman Aiden

bioRxiv 205740; doi: https://doi.org/10.1101/205740 New Results
A unified computational framework for modeling genome-wide nucleosome landscape
Hu Jin, Alex I. Finnegan, Jun S. Song

bioRxiv 202580; doi: https://doi.org/10.1101/202580 New Results
Analytic combinatorics for bioinformatics I: seeding methods
Guillaume J. Filion

bioRxiv 205427; doi: https://doi.org/10.1101/205427 New Results
zUMIs: A fast and flexible pipeline to process RNA sequencing data with UMIs
Swati Parekh, Christoph Ziegenhain, Beate Vieth, Wolfgang Enard, Ines Hellmann

bioRxiv 153940; doi: https://doi.org/10.1101/153940 New Results
Evolutionary variance analysis of the Glycoside Hydrolase Family 13: Structural evidence in classification and evolution
Jose Sergio Hleap, Christian Blouin

bioRxiv 201251; doi: https://doi.org/10.1101/201251 New Results

Bioinformatics

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