Bioinformatics

MACREL: antimicrobial peptide screening in genomes and metagenomes
Celio Dias Santos-Junior, Shaojun Pan, Xing-Ming Zhao, Luis Pedro Coelho

bioRxiv 2019.12.17.880385; doi: https://doi.org/10.1101/2019.12.17.880385 New Results

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TopicNet: a framework for measuring transcriptional regulatory network change
Shaoke Lou, Tianxiao Li, Xiangmeng Kong, Jing Zhang, Jason Liu, Donghoon Lee, Mark Gerstein

bioRxiv 862177; doi: https://doi.org/10.1101/862177 New Results

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TMSNP: a web server to predict pathogenesis of missense mutations in transmembrane region of membrane proteins
Adrian Garcia-Recio Sr., Jose Carlos Gomez-Tamayo, Merceded Campillo, Arnau Cordomi, Mireia Olivella

bioRxiv 2020.01.21.913764; doi: https://doi.org/10.1101/2020.01.21.913764 New Results

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Privacy-preserving biomedical database queries with optimal privacy-utility trade-offs
Hyunghoon Cho, Sean Simmons, Ryan Kim, Bonnie Berger

bioRxiv 2020.01.16.909010; doi: https://doi.org/10.1101/2020.01.16.909010 New Results

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Survey of metaproteomics software tools for functional microbiome analysis.
Ray Sajulga Jr., Caleb Easterly, Michael Riffle, Bart Mesuere, Thilo Muth, Subina Mehta, Praveen Kumar, James Johnson, Bjoern Andreas Gruening, Henning Schiebenhoefer, Carolin Kolmeder, Stephan Fuchs, Brook Nunn, Joel Rudney, Timothy Griffin, Pratik Jagtap

bioRxiv 2020.01.07.897561; doi: https://doi.org/10.1101/2020.01.07.897561 New Results

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chromoMap: An R package for Interactive Visualization and Annotation of Chromosomes
Lakshay Anand, Carlos Marcelino Rodríguez López

bioRxiv 605600; doi: https://doi.org/10.1101/605600 New Results

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FINET: Fast Inferring NETwork
ANYOU WANG, RONG HAI

bioRxiv 733683; doi: https://doi.org/10.1101/733683 New Results

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BATMAN: fast and accurate integration of single-cell RNA-Seq datasets via minimum-weight matching
Igor Mandric, Brian Hill, Malika Kumar Freund, Mike Thompson, Eran Halperin

bioRxiv 2020.01.22.915629; doi: https://doi.org/10.1101/2020.01.22.915629 New Results

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Automated Workflow For Peptide-level Quantitation From DIA/ SWATH-MS Data
Shubham Gupta, Hannes Rost

bioRxiv 2020.01.21.914788; doi: https://doi.org/10.1101/2020.01.21.914788 Confirmatory Results

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A repository of web-based bioinformatics resources developed in India
Abhishek Agarwal, Piyush Agrawal, Aditi Sharma, Vinod Kumar, Chirag Mugdal, Gajendra P.S. Raghava

bioRxiv 2020.01.21.855627; doi: https://doi.org/10.1101/2020.01.21.855627 New Results

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Bioinformatics

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