Bioinformatics

DeepProfile: Deep learning of cancer molecular profiles for precision medicine
Ayse Berceste Dincer, Safiye Celik, Naozumi Hiranuma, Su-In Lee

bioRxiv 278739; doi: https://doi.org/10.1101/278739 New Results
Efficient multi-task chemogenomics for drug specificity prediction
Benoit Playe, Chloe-Agathe Azencott, Veronique Stoven

bioRxiv 193391; doi: https://doi.org/10.1101/193391 New Results
iSEE: Interface Structure, Evolution and Energy-based machine learning predictor of binding affinity changes upon mutations
Cunliang Geng, Anna Vangone, Gert E. Folkers, Li C. Xue, Alexandre M.J.J. Bonvin

bioRxiv 331280; doi: https://doi.org/10.1101/331280 New Results
Using global t-SNE to preserve inter-cluster data structure
Yuansheng Zhou, Tatyana Sharpee

bioRxiv 331611; doi: https://doi.org/10.1101/331611 New Results
Integrating genotype and weather variables for soybean yield prediction using deep learning
Johnathon M Shook, Linjiang Wu, Tryambak Gangopadhyay, Baskar Ganapathysubramanian, Soumik Sarkar, Asheesh K Singh

bioRxiv 331561; doi: https://doi.org/10.1101/331561 New Results
Mass spectra alignment using virtual lock-masses
Francis Brochu, Pier-Luc Plante, Alexandre Drouin, François Laviolette, Mario Marchand, Jacques Corbeil

bioRxiv 292425; doi: https://doi.org/10.1101/292425 New Results
Attend and Predict: Understanding Gene Regulation by Selective Attention on Chromatin
Ritambhara Singh, Jack Lanchantin, Arshdeep Sekhon, Yanjun Qi

bioRxiv 329334; doi: https://doi.org/10.1101/329334 Confirmatory Results
Rapid alignment-free phylogenetic identification of metagenomic sequences
Benjamin Linard, Krister Swenson, Fabio Pardi

bioRxiv 328740; doi: https://doi.org/10.1101/328740 New Results
Preoperative predictions of in-hospital mortality using electronic medical record data
Brian Hill, Robert P Brown, Eilon Gabel, Christine Lee, Maxime Cannesson, Loes Olde Loohuis, Ruth Johnson, Brandon Jew, Uri Maoz, Aman Mahajan, Sriram Sankararaman, Ira Hofer, Eran Halperin

bioRxiv 329813; doi: https://doi.org/10.1101/329813 New Results
REVA: a rank-based multi-dimensional measure of correlation
Bahman Afsari, Alexander Favorov, Elana J Fertig, Leslie Cope

bioRxiv 330498; doi: https://doi.org/10.1101/330498 New Results

Bioinformatics

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