Bioinformatics

A Latent Allocation Model for the Analysis of Microbial Composition and Disease
Ko Abe, Masaaki Hirayama, Kinji Ohno, Teppei Shimamura

bioRxiv 396903; doi: https://doi.org/10.1101/396903 New Results
tmap: topological analysis of population-scale microbiome data
Tianhua Liao, Yuchen Wei, Mingjing Luo, Guoping Zhao, Haokui Zhou

bioRxiv 396960; doi: https://doi.org/10.1101/396960 New Results
DocClustering: An implementation of the novel PS-Document Clustering algorithm
Jens Doerpinghaus, Sebastian Schaaf, Marc Jacobs

bioRxiv 397133; doi: https://doi.org/10.1101/397133 Confirmatory Results
Marker-based watershed transform method for fully automatic mandibular segmentation from low-dose CBCT images
Yi Fan, Richard Beare, Harold Matthews, Paul Schneider, Nicky Kilpatrick, John Clement, Peter Claes, Anthony Penington, Christopher Adamson

bioRxiv 397166; doi: https://doi.org/10.1101/397166 New Results
Long fragments achieve lower base quality in Illumina paired-end sequencing
Ge Tan, Lennart Opitz, Ralph Schlapbach, Hubert Rehrauer

bioRxiv 397158; doi: https://doi.org/10.1101/397158 New Results
Divine: Prioritizing Genes for Rare Mendelian Disease in Whole Exome Sequencing Data
Changjin Hong, Jean R Clemenceau, Yunku Yeu, Tae Hyun Hwang

bioRxiv 396655; doi: https://doi.org/10.1101/396655 New Results
Fast Batch Alignment of Single Cell Transcriptomes Unifies Multiple Mouse Cell Atlases into an Integrated Landscape
Jong-Eun Park, Krzysztof Polanski, Kerstin Meyer, Sarah A Teichmann

bioRxiv 397042; doi: https://doi.org/10.1101/397042 New Results
ENIGMA: An Enterotype-Like Unigram Mixture Model for Microbial Association Analysis
Ko Abe, Masaaki Hirayama, Kinji Ohno, Teppei Shimamura

bioRxiv 397091; doi: https://doi.org/10.1101/397091 New Results
Genome Functional Annotation using Deep Convolutional Neural Networks
Ghazaleh Khodabandelou, Etienne Routhier, Julien Mozziconacci

bioRxiv 330308; doi: https://doi.org/10.1101/330308 New Results
Probabilistic modeling of personalized drug combinations from integrated chemical screen and molecular data in sarcoma
Noah E Berlow, Rishi Rikhi, Mathew N Geltzeiler, Jinu Abraham, Matthew N Svalina, Lara E Davis, Erin Wise, Maria Mancini, Jonatham Noujaim, Atiya Mansoor, Michael J Quist, Kevin L Matlock, Martin W Goros, Brian S Hernandez, Yee C Duong, Khin Thway, Tomohide Tsukahara, Jun Nishio, Elaine C Huang, Susie Airhart, Carol J Bult, Regina Gandour-Edwards, Robert G Maki, Robin L Jones, Joel E Michalek, Milan Milovancev, Souparno Ghosh, Ranadip Pal, Charles Keller

bioRxiv 396358; doi: https://doi.org/10.1101/396358 New Results

Bioinformatics

Pages