Bioinformatics

mLDM: a new hierarchical Bayesian statistical model for sparse microbioal association discovery
Yuqing Yang, Ning Chen, Ting Chen

bioRxiv 042630; doi: https://doi.org/10.1101/042630 Confirmatory Results

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AnnoLnc: a web server for systematically annotating novel human lncRNAs
Mei Hou, Xing Tang, Feng Tian, Fangyuan Shi, Fenglin Liu, Ge Gao

bioRxiv 042655; doi: https://doi.org/10.1101/042655

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The Ensembl Variant Effect Predictor
William McLaren, Laurent Gil, Sarah E Hunt, Harpreet Singh Riat, Graham R. S. Ritchie, Anja Thormann, Paul Flicek, Fiona Cunningham

bioRxiv 042374; doi: https://doi.org/10.1101/042374

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A simple analytical formula to compute the residual Mutual Information between pairs of data vectors
Jens Kleinjung, Ton C.C. Coolen

bioRxiv 041988; doi: https://doi.org/10.1101/041988

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Vcfanno: fast, flexible annotation of genetic variants
Brent S. Pedersen, Ryan M. Layer, Aaron R. Quinlan

bioRxiv 041863; doi: https://doi.org/10.1101/041863

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An alternative class of targets for microRNAs containing CG dinucleotide
Zheng Yan, Bin Zhang, Haiyang Hu, Gangcai Xie, Song Guo, Philipp Khaitovich, Yi-Ping Phoebe Chen

bioRxiv 026708; doi: https://doi.org/10.1101/026708

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Does the choice of nucleotide substitution models matter topologically?
Michael Hoff, Stefan Orf, Benedikt Riehm, Diego Darriba, Alexandros Stamatakis

bioRxiv 041566; doi: https://doi.org/10.1101/041566 Confirmatory Results

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4C-ker: A method to reproducibly identify genome-wide interactions captured by 4C-Seq experiments
Ramya Raviram, Pedro P. Rocha, Christian L. Müller, Emily R. Miraldi, Sana Badri, Yi Fu, Emily Swanzey, Charlotte Proudhon, Valentina Snetkova, Richard Bonneau, Jane Skok

bioRxiv 030569; doi: https://doi.org/10.1101/030569

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Kronos: a workflow assembler for genome analytics and informatics
M Jafar Taghiyar, Jamie Rosner, Diljot Grewal, Bruno Grande, Rad Aniba, Jasleen Grewal, Paul C Boutros, Ryan D Morin, Ali Bashashati, Sohrab P Shah

bioRxiv 040352; doi: https://doi.org/10.1101/040352

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Enabling the democratization of the genomics revolution with a fully integrated web-based bioinformatics platform
Po-E Li, Chien-Chi Lo, Joseph J. Anderson, Karen W. Davenport, Kimberly A. Bishop-Lilly, Yan Xu, Sanaa Ahmed, Shihai Feng, Vishwesh P. Mokashi, Patrick S. G. Chain

bioRxiv 040477; doi: https://doi.org/10.1101/040477

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Bioinformatics

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