Bioinformatics

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Bohdan B. Khomtchouk, Kasra A. Vand, Thor Wahlestedt, Kelly Khomtchouk, Mohammed K. Sayed, Claes Wahlestedt

bioRxiv 069575; doi: https://doi.org/10.1101/069575

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HySA: A Hybrid Structural variant Assembly approach using next generation and single-molecule sequencing technologies
Xian Fan, Mark Chaisson, Luay Nakhleh, Ken Chen

bioRxiv 069815; doi: https://doi.org/10.1101/069815

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scater: pre-processing, quality control, normalisation and visualisation of single-cell RNA-seq data in R
Davis J. McCarthy, Kieran R. Campbell, Aaron T. L. Lun, Quin F. Wills

bioRxiv 069633; doi: https://doi.org/10.1101/069633

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Statistical Association Mapping of Population-Structured Genetic Data
A. Najafi, S. Janghorbani, S. A. Motahari, E. Fatemizadeh

bioRxiv 069658; doi: https://doi.org/10.1101/069658

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OncoSimulR: genetic simulation of cancer progression with arbitrary epistasis and mutator genes
Ramon Diaz-Uriarte

bioRxiv 069500; doi: https://doi.org/10.1101/069500

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Peptide partitions and protein identification: a computational analysis
G. Sampath

bioRxiv 069526; doi: https://doi.org/10.1101/069526

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Higher classification sensitivity of short metagenomic reads with CLARK-S
Rachid Ounit, Stefano Lonardi

bioRxiv 053462; doi: https://doi.org/10.1101/053462

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phyC: Clustering cancer evolutionary trees
Yusuke Matsui, Atsushi Niida, Ryutaro Uchi, Koshi Mimori, Satoru Miyano, Teppei Shimamura

bioRxiv 069302; doi: https://doi.org/10.1101/069302

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Gene expression markers of Tumor Infiltrating Leukocytes
Patrick Danaher, Sarah Warren, Lucas Dennis, Leonard D’Amico, Andrew White, Mary L. Disis, Melissa A. Geller, Kunle Odunsi, Joseph Beechem, Steven P. Fling

bioRxiv 068940; doi: https://doi.org/10.1101/068940

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Reproducible Computational Workflows with Continuous Analysis
Brett K. Beaulieu-Jones, Casey S. Greene

bioRxiv 056473; doi: https://doi.org/10.1101/056473

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Bioinformatics

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