Bioinformatics

Metagenomic binning through low density hashing
Yunan Luo, Y. William Yu, Jianyang Zeng, Bonnie Berger, Jian Peng

bioRxiv 133116; doi: https://doi.org/10.1101/133116

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How to normalize metatranscriptomic count data for differential expression analysis
Heiner Klingenberg, Peter Meinicke

bioRxiv 134650; doi: https://doi.org/10.1101/134650

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Simulating the Dynamics of Targeted Capture Sequencing with CapSim
Minh Duc Cao, Devika Ganesamoorthy, Lachlan J.M. Coin

bioRxiv 134510; doi: https://doi.org/10.1101/134510

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Efficient repositioning of approved drugs as anti-HIV agents using Anti-HIV-Predictor
Shao-Xing Dai, Huan Chen, Wen-Xing Li, Yi-Cheng Guo, Jia-Qian Liu, Jun-Juan Zheng, Qian Wang, Hui-Juan Li, Bi-Wen Chen, Yue-Dong Gao, Gong-Hua Li, Yong-Tang Zheng, Jing-Fei Huang

bioRxiv 087445; doi: https://doi.org/10.1101/087445

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MotifMark: Finding Regulatory Motifs in DNA Sequences
Hamid Reza Hassanzadeh, Pushkar Kolhe, Charles L. Isbell, May D. Wang

bioRxiv 134296; doi: https://doi.org/10.1101/134296

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CircMarker: A Fast and Accurate Algorithm for Circular RNA Detection
Xin Li, Chong Chu, Jingwen Pei, Ion Măndoiu, Yufeng Wu

bioRxiv 134411; doi: https://doi.org/10.1101/134411

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taxMaps - Ultra-comprehensive and highly accurate taxonomic classification of short-read data in reasonable time
André Corvelo, Wayne E. Clarke, Nicolas Robine, Michael C. Zody

bioRxiv 134023; doi: https://doi.org/10.1101/134023

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In-silico read normalization using set multi-cover optimization
Dilip A Durai, Marcel H Schulz

bioRxiv 133579; doi: https://doi.org/10.1101/133579

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Real-time demultiplexing Nanopore barcoded sequencing data with npBarcode
Son Hoang Nguyen, Tania Duarte, Lachlan J. M. Coin, Minh Duc Cao

bioRxiv 134155; doi: https://doi.org/10.1101/134155

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A tandem simulation framework for predicting mapping quality
Ben Langmead

bioRxiv 103952; doi: https://doi.org/10.1101/103952

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Bioinformatics

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