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  • FASTCAR: Rapid alignment-free prediction of sequence alignment identity scores using self-supervised general linear models
    Benjamin T James, Brian B Luczak, Hani Z Girgis
    bioRxiv 380824; doi: https://doi.org/10.1101/380824 New Results
  • Comparison Between UMAP and t-SNE for Multiplex-Immunofluorescence Derived Single-Cell Data from Tissue Sections
    Duoduo Wu, Joe Yeong, Grace Tan, Marion Chevrier, Josh Loh, Tony Lim, Jinmiao Chen
    bioRxiv 549659; doi: https://doi.org/10.1101/549659 New Results
  • VariantKey - A Reversible Numerical Representation of Human Genetic Variants
    Nicola Asuni, Steven Wilder
    bioRxiv 473744; doi: https://doi.org/10.1101/473744 New Results
  • Host_microbe_PPI - R package to analyse intra-species and inter-species protein-protein interactions in the model plant Arabidopsis thaliana
    Thomas Nussbaumer
    bioRxiv 551275; doi: https://doi.org/10.1101/551275 New Results
  • CompScore: boosting structure-based virtual screening performance by incorporating docking scoring functions components into consensus scoring
    Yunierkis Perez-Castillo, Stellamaris Sotomayor-Burneo, Karina Jimenes-Vargas, Mario Gonzalez-Rodriguez, Maykel Cruz-Monteagudo, Vinicio Armijos-Jaramillo, M. Natalia D. S. Cordeiro, Fernanda Borges, Aminael Sanchez-Rodriguez, Eduardo Tejera
    bioRxiv 550590; doi: https://doi.org/10.1101/550590 New Results
  • PRECISE: A domain adaptation approach to transfer predictors of drug response from pre-clinical models to tumors
    Soufiane Mourragui, Marco Loog, Marcel JT Reinders, Lodewyk FA Wessels
    bioRxiv 536797; doi: https://doi.org/10.1101/536797 New Results
  • Read-SpaM: assembly-free and alignment-free comparison of bacterial genomes with low sequencing coverage
    Anna Katharina Lau, Chris-Andre Leimeister, Burkhard Morgenstern
    bioRxiv 550632; doi: https://doi.org/10.1101/550632 New Results
  • Detection and assembly of novel sequence insertions using Linked-Read technology
    Dmitry Meleshko, Patrick Marks, Stephen Williams, Iman Hajirasouliha
    bioRxiv 551028; doi: https://doi.org/10.1101/551028 New Results
  • Alpaca: a kmer-based approach for investigating mosaic structures in microbial genomes
    Alex Salazar, Thomas Abeel
    bioRxiv 551234; doi: https://doi.org/10.1101/551234 New Results
  • multiPhATE: bioinformatics pipeline for functional annotation of phage isolates
    Carol E Zhou, Stephanie A Malfatti, Jeffrey A Kimbrel, Casandra W Philipson, Katelyn E McNair, Theron C Hamilton, Robert A Edwards, Brian E Souza
    bioRxiv 551010; doi: https://doi.org/10.1101/551010 New Results

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