Bioinformatics

scNODE : Generative Model for Temporal Single Cell Transcriptomic Data Prediction
Jiaqi Zhang, Erica Larschan, Jeremy Bigness, Ritambhara Singh

bioRxiv 2023.11.22.568346; doi: https://doi.org/10.1101/2023.11.22.568346 New Results

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Gaining Biological Insights through Supervised Data Visualization
Jake S. Rhodes, Adrien Aumon, Sacha Morin, Marc Girard, Catherine Larochelle, Boaz Lahav, Elsa Brunet-Ratnasingham, Wei Zhang, Adele Cutler, Anhong Zhou, Daniel E. Kaufmann, Stephanie Zandee, Alexandre Prat, Guy Wolf, Kevin R. Moon

bioRxiv 2023.11.22.568384; doi: https://doi.org/10.1101/2023.11.22.568384 New Results

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scCross: Bridging Modalities in Single-cell Multi-omics – Seamless Integration, Cross-modal Synthesis, and In-silico Exploration
Xiuhui Yang, Koren K. Mann, Hao Wu, Jun Ding

bioRxiv 2023.11.22.568376; doi: https://doi.org/10.1101/2023.11.22.568376 New Results

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Towards modeling genome-scale knowledge in the global ocean
Antoine Régimbeau, Olivier Aumont, Chris Bowler, Lionel Guidi, George A. Jackson, Eric Karsenti, Laurent Memery, Alessandro Tagliabue, Damien Eveillard

bioRxiv 2023.11.23.568447; doi: https://doi.org/10.1101/2023.11.23.568447 New Results

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scSniper: Single-cell Deep Neural Network-based Identification of Prominent Biomarkers
Mingyang Li, Yanshuo Chen, Jun Ding

bioRxiv 2023.11.22.568389; doi: https://doi.org/10.1101/2023.11.22.568389 New Results

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A Simple Strategy for Identifying Conserved Features across Non-independent Omics Studies
Eric Reed, Paola Sebastiani

bioRxiv 2023.11.22.568276; doi: https://doi.org/10.1101/2023.11.22.568276 New Results

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Immuno-informatics Study Identifies Conserved T Cell Epitopes in Non-structural Proteins of Bluetongue Virus Serotypes: Formulation of Computationally Optimized Next-Generation Broad-spectrum Multiepitope Vaccine
Harish Babu Kolla, Mansi Dutt, Anuj Kumar, Roopa Hebbandi Nanjunadappa, Tobias Karakach, Karam Pal Singh, David Kelvin, Peter Paul Clement Mertens, Channakeshava Sokke Umeshappa

bioRxiv 2023.11.23.566885; doi: https://doi.org/10.1101/2023.11.23.566885 New Results

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Semi-supervised learning and large-scale docking data accelerate RNA virtual screening
Juan G. Carvajal-Patiño, Vincent Mallet, David Becerra, L. Fernando Niño V., Carlos Oliver, Jérôme Waldispühl

bioRxiv 2023.11.23.568394; doi: https://doi.org/10.1101/2023.11.23.568394 New Results

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VirusImmu: a novel ensemble machine learning approach for viral immunogenicity prediction
Jing Li, Zhongpeng Zhao, ChengZheng Tai, Ting Sun, Lingyun Tan, Xinyu Li, Wei He, HongJun Li, Jing Zhang

bioRxiv 2023.11.23.568426; doi: https://doi.org/10.1101/2023.11.23.568426 New Results

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Genome-wide detection of somatic mosaicism at short tandem repeats
Aarushi Sehgal, Helyaneh Ziaei-Jam, Andrew Shen, Melissa Gymrek

bioRxiv 2023.11.22.568371; doi: https://doi.org/10.1101/2023.11.22.568371 New Results

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Bioinformatics

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