Bioinformatics

MARS: Motif Assessment and Ranking Suite for transcription factor binding motifs
Caleb Kipkurui Kibet, Philip Machanick

bioRxiv 065615; doi: https://doi.org/10.1101/065615

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Ensembl Core Software Resources: storage and programmatic access for DNA sequence and genome annotation
Magali Ruffier, Andreas Kähäri, Monika Komorowska, Stephen Keenan, Matthew R. Laird, Ian Longden, Glenn Proctor, Searle Steve, Daniel Staines, Kieron Taylor, Alessandro Vullo, Andrew Yates, Daniel Zerbino, Paul Flicek

bioRxiv 087239; doi: https://doi.org/10.1101/087239

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lncRNA-screen: an interactive platform for computationally screening long non-coding RNAs in large genomics datasets
Yixiao Gong, Hsuan-Ting Huang, Yu Liang, Thomas Trimarchi, Iannis Aifantis, Aristotelis Tsirigos

bioRxiv 087080; doi: https://doi.org/10.1101/087080

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A Deep Boosting Based Approach for Capturing the Sequence Binding Preferences of RNA-Binding Proteins from High-Throughput CLIP-Seq Data
Shuya Li, Fanghong Dong, Yuexin Wu, Sai Zhang, Chen Zhang, Xiao Liu, Tao Jiang, Jianyang Zeng

bioRxiv 086421; doi: https://doi.org/10.1101/086421 Confirmatory Results

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EthSEQ: ethnicity annotation from whole exome sequencing data
Alessandro Romanel, Tuo Zhang, Olivier Elemento, Francesca Demichelis

bioRxiv 085837; doi: https://doi.org/10.1101/085837

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Establishing wonder oil, Solanesol, as a novel inhibitor for Focal Adhesive Kinase by in silico strategies
Betty Daneial, Devashish Das, V. J. Jacob Paul, R. Guruprasad

bioRxiv 086660; doi: https://doi.org/10.1101/086660 Confirmatory Results

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Unified Framework for Representing and Ranking
Jim Jing-Yan Wang, Halima Bensmail

bioRxiv 086678; doi: https://doi.org/10.1101/086678

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Rotamer libraries for the high-resolution design of β-amino acid foldamers
Andrew M. Watkins, Timothy W. Craven, P. Douglas Renfrew, Paramjit S. Arora, Richard Bonneau

bioRxiv 086389; doi: https://doi.org/10.1101/086389

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ploidyNGS: Visually exploring ploidy with Next Generation Sequencing data
Renato Augusto Corrêa dos Santos, Gustavo Henrique Goldman, Diego Mauricio Riaño-Pachón

bioRxiv 086488; doi: https://doi.org/10.1101/086488

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Predicting the phenotype of Mendelian disease missense mutations using amino acid conservation and protein stability change
Maria T. Chavez, Ethan O. Perlstein

bioRxiv 086470; doi: https://doi.org/10.1101/086470

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Bioinformatics

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