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  • The Image Data Resource: A Scalable Platform for Biological Image Data Access, Integration, and Dissemination
    Eleanor Williams, Josh Moore, Simon W. Li, Gabriella Rustici, Aleksandra Tarkowska, Anatole Chessel, Simone Leo, Bálint Antal, Richard K. Ferguson, Ugis Sarkans, Alvis Brazma, Rafael E. Carazo Salas, Jason R. Swedlow
    bioRxiv 089359; doi: https://doi.org/10.1101/089359
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  • Multiple Kernel Learning approach for Medical Image Analysis
    Nisar Wani, Khalid Raza
    bioRxiv 121509; doi: https://doi.org/10.1101/121509
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  • Squeakr: An Exact and Approximate k-mer Counting System
    Prashant Pandey, Michael A. Bender, Rob Johnson, Rob Patro
    bioRxiv 122077; doi: https://doi.org/10.1101/122077
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  • SUPERmerge: ChIP-seq coverage island analysis algorithm for broad histone marks
    Bohdan B. Khomtchouk, Derek Van Booven, Claes Wahlestedt
    bioRxiv 121897; doi: https://doi.org/10.1101/121897
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  • Enhancing sensitivity and controlling false discovery rate in somatic indel discovery using a latent variable model
    Louis J. Dijkstra, Johannes Köster, Tobias Marschall, Alexander Schönhuth
    bioRxiv 121954; doi: https://doi.org/10.1101/121954
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  • Plasmid Profiler: Comparative Analysis of Plasmid Content in WGS Data
    Adrian Zetner, Jennifer Cabral, Laura Mataseje, Natalie C Knox, Philip Mabon, Michael Mulvey, Gary Van Domselaar
    bioRxiv 121350; doi: https://doi.org/10.1101/121350
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  • Correcting for cell-type heterogeneity in epigenome-wide association studies: premature analyses and conclusions
    Shijie C Zheng, Stephan Beck, Andrew E. Jaffe, Devin C. Koestler, Kasper D. Hansen, Andres E. Houseman, Rafael A. Irizarry, Martin Widschwendter, Andrew E. Teschendorff
    bioRxiv 121533; doi: https://doi.org/10.1101/121533
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  • Scalable Multi-Sample Single-Cell Data Analysis by Partition-Assisted Clustering and Multiple Alignments of Networks
    Ye Henry Li, Dangna Li, Nikolay Samusik, Xiaowei Wang, Leying Guan, Garry P. Nolan, Wing Hung Wong
    bioRxiv 116566; doi: https://doi.org/10.1101/116566
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  • ClusterEnG: An interactive educational web resource for clustering big data
    Mohith Manjunath, Yi Zhang, Steve H. Yeo, Omar Sobh, Nathan Russell, Christian Followell, Colleen Bushell, Umberto Ravaioli, Jun S. Song
    bioRxiv 120915; doi: https://doi.org/10.1101/120915
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  • Genome build information is an essential part of genomic track files
    Chakravarthi Kanduri, Diana Domanska, Eivind Hovig, Geir Kjetil Sandve
    bioRxiv 120923; doi: https://doi.org/10.1101/120923
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