Biophysics

Predicting X-ray Diffuse Scattering from Translation Libration Screw Structural Ensembles
Andrew H. Van Benschoten, Pavel V. Afonine, Thomas C. Terwilliger, Michael E. Wall, Colin J. Jackson, Nicholas K. Sauter, Paul D. Adams, Alexandre Urzhumtsev, James S. Fraser

bioRxiv 012955; doi: https://doi.org/10.1101/012955

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From deep TLS validation to ensembles of atomic models built from elemental motions
Alexre Urzhumtsev, Pavel V. Afonine, Andrew H. Van Benschoten, James S. Fraser, Paul D. Adams

bioRxiv 012930; doi: https://doi.org/10.1101/012930

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Too packed to change: site-specific substitution rates and side-chain packing in protein evolution
María Laura Marcos, Julian Echave

bioRxiv 013359; doi: https://doi.org/10.1101/013359

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Public good diffusion limits microbial mutualism
Rajita Menon, Kirill S. Korolev

bioRxiv 013144; doi: https://doi.org/10.1101/013144

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A biophysical approach to predicting protein-DNA binding energetics
George Locke, Alexandre V. Morozov

bioRxiv 012864; doi: https://doi.org/10.1101/012864

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Exact solutions of linear reaction-diffusion processes on a uniformly growing domain: Criteria for successful colonization
Matthew J Simpson

bioRxiv 011122; doi: https://doi.org/10.1101/011122

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Chromatin Loops as Allosteric Modulators of Enhancer-Promoter Interactions
Boryana Doyle, Geoffrey Fudenberg, Maxim Imakaev, Leonid A. Mirny

bioRxiv 003087; doi: https://doi.org/10.1101/003087

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DNA Denaturing through Photon Dissipation: A Possible Route to Archean Non-enzymatic Replication
Karo Michaelian, Norberto Santillán Padilla

bioRxiv 009126; doi: https://doi.org/10.1101/009126

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Relationship between protein thermodynamic constraints and variation of evolutionary rates among sites
Julian Echave, Eleisha L. Jackson, Claus O. Wilke

bioRxiv 009423; doi: https://doi.org/10.1101/009423

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Shifts in stability and control effectiveness during evolution of paraves support aerial maneuvering hypotheses for flight origins
Dennis Evangelista, Sharlene Cam, Tony Huynh, Austin Kwong, Homayun Mehrabani, Kyle Tse, Robert Dudley

bioRxiv 001750; doi: https://doi.org/10.1101/001750

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Biophysics

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