Genomics

Differential expression of glycosyltransferases identified through comprehensive pan-cancer analysis
Hayley M Dingerdissen, Jeet Vora, Edmund Cauley, Amanda Bell, Charles Hadley King, Raja Mazumder

bioRxiv 2021.06.15.448506; doi: https://doi.org/10.1101/2021.06.15.448506 New Results

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A Chromosome-level Genome Assembly of the Reed Warbler (Acrocephalus scirpaceus)
Camilla Lo Cascio Sætre, Fabrice Eroukhmanoff, Katja Rönkä, Edward Kluen, Rose Thorogood, James Torrance, Alan Tracey, William Chow, Sarah Pelan, Kerstin Howe, Kjetill S. Jakobsen, Ole K. Tørresen

bioRxiv 2021.08.02.454714; doi: https://doi.org/10.1101/2021.08.02.454714 New Results

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The DNA methylation landscape of five pediatric-tumor types
Alyssa C. Parker, Badi I. Quinteros, Stephen R. Piccolo

bioRxiv 2021.08.02.454814; doi: https://doi.org/10.1101/2021.08.02.454814 New Results

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NewWave: a scalable R/Bioconductor package for the dimensionality reduction and batch effect removal of single-cell RNA-seq data
Federico Agostinis, Chiara Romualdi, Gabriele Sales, Davide Risso

bioRxiv 2021.08.02.453487; doi: https://doi.org/10.1101/2021.08.02.453487 New Results

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Genome-Wide Detection of Imprinted Differentially Methylated Regions Using Nanopore Sequencing
Vahid Akbari, Jean-Michel Garant, Kieran O’Neill, Pawan Pandoh, Richard Moore, Marco A. Marra, Martin Hirst, Steven J.M. Jones

bioRxiv 2021.07.17.452734; doi: https://doi.org/10.1101/2021.07.17.452734 New Results

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Integrating Sample Similarities into Latent Class Analysis: A Tree-Structured Shrinkage Approach
Mengbing Li, Daniel E. Park, Maliha Aziz, Cindy M. Liu, Lance B. Price, Zhenke Wu

bioRxiv 2021.01.25.428033; doi: https://doi.org/10.1101/2021.01.25.428033 New Results

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DropletQC: improved identification of empty droplets and damaged cells in single-cell RNA-seq data
Walter Muskovic, Joseph E Powell

bioRxiv 2021.08.02.454717; doi: https://doi.org/10.1101/2021.08.02.454717 New Results

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Microbial community of recently discovered Auka vent field sheds light on vent biogeography and evolutionary history of thermophily
Daan R. Speth, Feiqiao B. Yu, Stephanie A. Connon, Sujung Lim, John S. Magyar, Manet E. Peña, Stephen R. Quake, Victoria J. Orphan

bioRxiv 2021.08.02.454472; doi: https://doi.org/10.1101/2021.08.02.454472 New Results

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Large differences in carbohydrate degradation and transport potential in the genomes of lichen fungal symbionts
Philipp Resl, Adina R. Bujold, Gulnara Tagirdzhanova, Peter Meidl, Sandra Freire Rallo, Mieko Kono, Samantha Fernández-Brime, Hörður Guðmundsson, Ólafur Sigmar Andrésson, Lucia Muggia, Helmut Mayrhofer, John P. McCutcheon, Mats Wedin, Silke Werth, Lisa M. Willis, Toby Spribille

bioRxiv 2021.08.01.454614; doi: https://doi.org/10.1101/2021.08.01.454614 New Results

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Plant-associated microbiomes promote nutrient turnover in impoverished substrates of a biodiversity hotspot
Antonio P. Camargo, Rafael Soares Correa de Souza, Juliana Jose, Isabel R. Gerhardt, Ricardo A. Dante, Supratim Mukherjee, Marcel Huntemann, Nikos C. Kyrpides, Marcelo F. Carazzolle, Paulo Arruda

bioRxiv 2021.07.30.454538; doi: https://doi.org/10.1101/2021.07.30.454538 New Results

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Genomics

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