Genomics

Integrative single-cell meta-analysis reveals disease-relevant vascular cell states and markers in human atherosclerosis
Jose Verdezoto Mosquera, Gaelle Auguste, Doris Wong, Adam W Turner, Chani J Hodonsky, Christian L Lino Cardenas, Konstantinos Theofilatos, Maxime Bos, Maryam Kavousi, Patricia Peyser, Manuel Mayr, Jason C Kovacic, Johan L.M. Bjorkegren, Rajeev Malhotra, Sander W van der Laan, Chongzhi Zang, Nathan Sheffield, Clint L Miller

bioRxiv 2022.10.24.513520; doi: https://doi.org/10.1101/2022.10.24.513520 New Results

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Spatially resolved multiomics of human cardiac niches
Kazumasa Kanemaru, James Cranley, Daniele Muraro, Antonio M.A. Miranda, Jan Patrick Pett, Monika Litvinukova, Natsuhiko Kumasaka, Siew Yen Ho, Krzysztof Polanski, Laura Richardson, Lukas Mach, Monika Dabrowska, Nathan Richoz, Sam N. Barnett, Shani Perera, Anna L Wilbrey-Clark, Carlos Talavera-López, Ilaria Mulas, Krishnaa T. Mahbubani, Liam Bolt, Lira Mamanova, Liz Tuck, Lu Wang, Margaret M. Huang, Martin Prete, Sophie Pritchard, John Dark, Kourosh Saeb-Parsy, Minal Patel, Menna R. Clatworthy, Norbert Hübner, Rasheda A. Chowdhury, Michela Noseda, Sarah A. Teichmann

bioRxiv 2023.01.30.526202; doi: https://doi.org/10.1101/2023.01.30.526202 New Results

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RTCpredictor: Identification of Read-Through Chimeric RNAs from RNA Sequencing Data
Sandeep Singh, Xinrui Shi, Syed Ahmad, Tommy Manley, Claire Piczak, Christopher Phung, Yunan Sun, Sarah Lynch, Aadi Sharma, Hui Li

bioRxiv 2023.02.02.526869; doi: https://doi.org/10.1101/2023.02.02.526869 New Results

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Genome sequencing, assembly and annotation of the carob tree, Ceratonia siliqua (Eudicots:Fabaceae)
Androniki C. Bibi, Panagiotis Ioannidis, Christos Bazakos, Kriton Kalantidis

bioRxiv 2023.02.03.526947; doi: https://doi.org/10.1101/2023.02.03.526947 New Results

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Discovery of NRG1-VII: a novel myeloid-derived class of NRG1 isoforms
Miguel Angel Berrocal-Rubio, Yair D.J Prawer, Marija Dinevska, Ricardo De Paoli-Iseppi, Samuel Stefanus Widodo, Nadia Rajab, William De Nardo, Jeannette C Hallab, Anran Li, Theo Mantamadiotis, Michael Clark, Christine Wells

bioRxiv 2023.02.02.525781; doi: https://doi.org/10.1101/2023.02.02.525781 New Results

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Hypothesis-free phenotype prediction within a genetics-first framework
Chang Lu, Jan Zaucha, Rihab Gam, Hai Fang, Ben Smithers, Matt E Oates, Miguel Bernabe-Rubio, James Williams, Natalie Zelenka, Arun Pandurangan, Himani Tandon, Hash Shihab, Raju Kalaivani, Minkyung Sung, Adam Sardar, Bastian Greshake Tzovaras, Davide Danovi, Julian Gough

bioRxiv 2023.02.01.526358; doi: https://doi.org/10.1101/2023.02.01.526358 New Results

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In-situ metagenomics: A platform for rapid sequencing and analysis of metagenomes in less than one day
Javier Tamames, Diego Jiménez, Álvaro Redondo, Sandra Martínez-García, Asunción De los Rios

bioRxiv 2023.01.25.525498; doi: https://doi.org/10.1101/2023.01.25.525498 New Results

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A harmonized public resource of deeply sequenced diverse human genomes
Zan Koenig, Mary T. Yohannes, Lethukuthula L. Nkambule, Julia K. Goodrich, Heesu Ally Kim, Xuefang Zhao, Michael W. Wilson, Grace Tiao, Stephanie P. Hao, Nareh Sahakian, Katherine R. Chao, gnomAD Project Consortium, Michael E. Talkowski, Mark J. Daly, Harrison Brand, Konrad J. Karczewski, Elizabeth G. Atkinson, Alicia R. Martin

bioRxiv 2023.01.23.525248; doi: https://doi.org/10.1101/2023.01.23.525248 New Results

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Genome sequence of Ophryocystis elektroscirrha, an apicomplexan parasite of monarch butterflies: cryptic diversity and response to host-sequestered plant chemicals
Andrew J. Mongue, Simon H. Martin, Rachel E. V. Manweiler, Helena Scullion, Jordyn L. Koehn, Jacobus C. de Roode, James R. Walters

bioRxiv 2023.02.01.526615; doi: https://doi.org/10.1101/2023.02.01.526615 New Results

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A vast evolutionarily transient translatome contributes to phenotype and fitness
Aaron Wacholder, Saurin Bipin Parikh, Nelson Castilho Coelho, Omer Acar, Carly Houghton, Lin Chou, Anne-Ruxandra Carvunis

bioRxiv 2021.07.17.452746; doi: https://doi.org/10.1101/2021.07.17.452746 New Results

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Genomics

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