Genomics

An update to the database for Acinetobacter baumannii capsular polysaccharide locus typing extends the extensive and diverse repertoire of genes found at and outside the K locus
Sarah M. Cahill, Ruth M. Hall, Johanna J. Kenyon

bioRxiv 2022.05.19.492579; doi: https://doi.org/10.1101/2022.05.19.492579 New Results

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Nucleotide resolution genetic mapping in pigs by publicly accessible whole genome imputation
Rongrong Ding, Rodrigo Savegnago, Jinding Liu, Nanye Long, Cheng Tan, Gengyuan Cai, Zhanwei Zhuang, Jie Wu, Ming Yang, Yibin Qiu, Donglin Ruan, Jianping Quan, Enqin Zheng, Linjun Hong, Zicong Li, Suxu Tan, Mohammd Bedhane, Robert Schnabel, Juan Steibel, Cedric Gondro, Jie Yang, Wen Huang, Zhenfang Wu

bioRxiv 2022.05.18.492518; doi: https://doi.org/10.1101/2022.05.18.492518 New Results

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The largest haplotype-phased and chromosome-scale genome assembly of the fungal pathogen, Puccinia polysora, by HiFi reads and Hi-C data
Junmin Liang, Yuanjie Li, Peter N. Dodds, Melania Figueroa, Jana Sperschneider, Shiling Han, Clement K.M. Tsui, Keyu Zhang, Leifu Li, Zhanhong Ma, Lei Cai

bioRxiv 2022.05.18.492400; doi: https://doi.org/10.1101/2022.05.18.492400 New Results

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Single molecule multi-omics reveals context-dependent regulation of enhancers by DNA methylation
Elisa Kreibich, Rozemarijn Kleinendorst, Guido Barzaghi, Sarah Kaspar, Arnaud R Krebs

bioRxiv 2022.05.19.492653; doi: https://doi.org/10.1101/2022.05.19.492653 New Results

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Ariadne: Synthetic Long Read Deconvolution Using Assembly Graphs
Lauren Mak, Dmitry Meleshko, David C. Danko, Waris N. Barakzai, Natan Belchikov, Iman Hajirasouliha

bioRxiv 2021.05.09.443255; doi: https://doi.org/10.1101/2021.05.09.443255 New Results

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A novel nematode species from the Siberian permafrost shares adaptive mechanisms for cryptobiotic survival with C. elegans dauer larva
Anastasia Shatilovich, Vamshidhar R. Gade, Martin Pippel, Tarja T. Hoffmeyer, Alexei V. Tchesunov, Lewis Stevens, Sylke Winkler, Graham M. Hughes, Sofia Traikov, Michael Hiller, Elizaveta Rivkina, Philipp H. Schiffer, Eugene W Myers, Teymuras V. Kurzchalia

bioRxiv 2022.01.28.478251; doi: https://doi.org/10.1101/2022.01.28.478251 New Results

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The regulatory landscapes of human ovarian ageing
Chen Jin, Xizhe Wang, Adam D. Hudgins, Amir Gamliel, Mingzhuo Pei, Seungsoo Kim, Daniela Contreras, Jan Hoeijmakers, Judith Campisi, Rogerio Lobo, Zev Williams, Michael G. Rosenfeld, Yousin Suh

bioRxiv 2022.05.18.492547; doi: https://doi.org/10.1101/2022.05.18.492547 New Results

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Developmental timing of programmed DNA elimination in Paramecium tetraurelia recapitulates germline transposon evolutionary dynamics
Coralie Zangarelli, Olivier Arnaiz, Mickaël Bourge, Kevin Gorrichon, Yan Jaszczyszyn, Nathalie Mathy, Loïc Escoriza, Mireille Bétermier, Vinciane Régnier

bioRxiv 2022.05.18.492358; doi: https://doi.org/10.1101/2022.05.18.492358 New Results

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Pervasive gene duplications as a major evolutionary driver of coral biology
Benjamin Noel, France Denoeud, Alice Rouan, Carol Buitrago-López, Laura Capasso, Julie Poulain, Emilie Boissin, Mélanie Pousse, Corinne Da Silva, Arnaud Couloux, Eric Armstrong, Quentin Carradec, Corinne Cruaud, Karine Labadie, Julie Lê-Hoang, Sylvie Tambutté, Valérie Barbe, Clémentine Moulin, Guillaume Bourdin, Guillaume Iwankow, Sarah Romac, Tara Pacific Consortium Coordinators, Denis Allemand, Serge Planes, Eric Gilson, Didier Zoccola, Patrick Wincker, Christian R Voolstra, Jean-Marc Aury

bioRxiv 2022.05.17.492263; doi: https://doi.org/10.1101/2022.05.17.492263 New Results

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Strain level centromere variation influences CENP-A association dynamics and centromere function
Uma P. Arora, Beth A. Sullivan, Beth L. Dumont

bioRxiv 2022.05.17.492352; doi: https://doi.org/10.1101/2022.05.17.492352 New Results

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Genomics

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