Genomics

Novel effector genes revealed by the genomic analysis of the phytopathogenic fungus Fusarium oxysporum f. sp. physali (Foph) that infects cape gooseberry plants
Jaime Simbaqueba, Edwin A Rodriguez, Diana M Burbano, Carolina Gonzalez, Alejandro Caro

bioRxiv 2020.08.10.235309; doi: https://doi.org/10.1101/2020.08.10.235309 New Results

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i6mA-CNN: a convolution based computational approach towards identification of DNA N6-Methyladenine sites in rice genome
Ruhul Amin, Chowdhury Rafeed, Md. Sadrul Toaha, Swakkhar Shatabda

bioRxiv 2020.07.08.194308; doi: https://doi.org/10.1101/2020.07.08.194308 New Results

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Single-nucleotide conservation state annotation of the SARS-CoV-2 genome
Soo Bin Kwon, Jason Ernst

bioRxiv 2020.07.13.201277; doi: https://doi.org/10.1101/2020.07.13.201277 New Results

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Historical genomics reveals the evolutionary mechanisms behind multiple outbreaks of the host-specific coffee wilt pathogen Fusarium xylarioides
Lily Peck, Reuben Nowell, Julie Flood, Matthew Ryan, Timothy Barraclough

bioRxiv 2020.08.07.241695; doi: https://doi.org/10.1101/2020.08.07.241695 New Results

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Biodiversity genomics of small metazoans: high quality de novo genomes from single specimens of field-collected and ethanol-preserved springtails
Clément Schneider, Christian Woehle, Carola Greve, Cyrille A. D'Haese, Magnus Wolf, Axel Janke, Miklós Bálint, Bruno Hüttel

bioRxiv 2020.08.10.244541; doi: https://doi.org/10.1101/2020.08.10.244541 New Results

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ViruSurf: an integrated database to investigate viral sequences
Arif Canakoglu, Pietro Pinoli, Anna Bernasconi, Tommaso Alfonsi, Damianos P. Melidis, Stefano Ceri

bioRxiv 2020.08.10.244624; doi: https://doi.org/10.1101/2020.08.10.244624 New Results

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Genetic-substructure and complex demographic history of South African Bantu speakers
Dhriti Sengupta, Ananyo Choudhury, Cesar Fortes-Lima, Shaun Aron, Gavin Whitelaw, Koen Bostoen, Hilde Gunnink, Natalia Chousou-Polydouri, Peter Delius, Stephen Tollman, F Gomez-Olive Casas, Shane Norris, Felistas Mashinya, Marianne Alberts, Scott Hazelhurst, Carina M Schlebusch, Michéle Ramsay

bioRxiv 2020.08.11.243840; doi: https://doi.org/10.1101/2020.08.11.243840 New Results

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Linkage Disequilibrium and Heterozygosity Modulate the Genetic Architecture of Human Complex Phenotypes
Dominic Holland, Oleksandr Frei, Rahul Desikan, Chun Chieh Fan, Alexey Shadrin, Olav Smeland, Ole A Andreassen, Anders Dale

bioRxiv 705285; doi: https://doi.org/10.1101/705285 New Results

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Different mutant RUNX1 oncoproteins program alternate haematopoietic differentiation trajectories
Sophie G Kellaway, Peter Keane, Benjamin Edginton-White, Regha Kakkad, Ella Kennett, Constanze Bonifer

bioRxiv 2020.08.10.244657; doi: https://doi.org/10.1101/2020.08.10.244657 New Results

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Insights into dispersed duplications and complex structural mutations from whole genome sequencing 706 families
Christopher W. Whelan, Robert E. Handsaker, Giulio Genovese, Seva Kashin, Monkol Lek, Jason Hughes, Joshua McElwee, Michael Lenardo, Daniel MacArthur, Steven A. McCarroll

bioRxiv 2020.08.03.235358; doi: https://doi.org/10.1101/2020.08.03.235358 New Results

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Genomics

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