Genomics

Differentiating Genomic SNPs Using Allele Depth and Predicted Genotype
Saam Hasan

bioRxiv 438325; doi: https://doi.org/10.1101/438325 New Results
A prognostic signature for lower-grade gliomas based on expression of long noncoding RNAs
Manjari Kiran, Ajay Chatrath, Xiwei Tang, Daniel Macrae Keenan, Anindya Dutta

bioRxiv 442616; doi: https://doi.org/10.1101/442616 New Results
Genome-wide signatures of local adaptation among seven stoneflies species along a nationwide latitudinal gradient in Japan
Maribet Gamboa, Kozo Watanabe

bioRxiv 440552; doi: https://doi.org/10.1101/440552 New Results
A haplotype-resolved draft genome of the European sardine (Sardina pilchardus)
Bruno Louro, Gianluca De Moro, Carlos M.E.V.R. Garcia, Cymon Cox, Ana Veríssimo, Stephen J Sabatino, António M. Santos, Adelino V. M. Canario

bioRxiv 441774; doi: https://doi.org/10.1101/441774 New Results
The first draft genomes of the ant Formica exsecta, and its Wolbachia endosymbiont reveal extensive gene transfer from endosymbiont to host.
Kishor Dhaygude, Abhilash Nair, Helena Johansson, Yannick Wurm, Liselotte Sundström

bioRxiv 436691; doi: https://doi.org/10.1101/436691 New Results
Estimation of allele-specific fitness effects across human protein-coding sequences and implications for disease
Yi-Fei Huang, Adam Siepel

bioRxiv 441337; doi: https://doi.org/10.1101/441337 New Results
Predicting mRNA abundance directly from genomic sequence using deep convolutional neural networks
Vikram Agarwal, Jay Shendure

bioRxiv 416685; doi: https://doi.org/10.1101/416685 New Results
Evolutionary characteristics of intergenic transcribed regions indicate widespread noisy transcription in the Poaceae
John P Lloyd, Megan J Bowman, Christina B Azodi, Rosalie P Sowers, Gaurav D Moghe, Kevin L Childs, Shin-Han Shiu

bioRxiv 440933; doi: https://doi.org/10.1101/440933 New Results
Rapid profiling of the preterm infant gut microbiota using nanopore sequencing aids pathogen diagnostics
Richard M. Leggett, Cristina Alcon-Giner, Darren Heavens, Shabhonam Caim, Thomas C. Brook, Magdalena Kujawska, Samuel Martin, Lesley Hoyles, Paul Clarke, Lindsay Hall, Matthew D. Clark

bioRxiv 180406; doi: https://doi.org/10.1101/180406 New Results
The fate of deleterious variants in a barley genomic prediction population
Thomas JY Kono, Chaochih Liu, Emily E Vonderharr, Daniel Koenig, Justin C Fay, Kevin P Smith, Peter Laurent Morrell

bioRxiv 442020; doi: https://doi.org/10.1101/442020 New Results

Genomics

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