Genomics

A unified Bayesian approach to transcriptome-wide association study
Arnab Kumar Khan, Tanushree Haldar, Arunabha Majumdar

bioRxiv 2024.09.12.612639; doi: https://doi.org/10.1101/2024.09.12.612639 New Results

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Mitochondrial DNA mutations in human oocytes undergo frequency-dependent selection but do not increase with age
Barbara Arbeithuber, Kate Anthony, Bonnie Higgins, Peter Oppelt, Omar Shebl, Irene Tiemann-Boege, Francesca Chiaromonte, Thomas Ebner, Kateryna D. Makova

bioRxiv 2024.12.09.627454; doi: https://doi.org/10.1101/2024.12.09.627454 New Results

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Long-read genomics reveal extensive nuclear-specific evolution and allele-specific expression in a dikaryotic fungus
Rita Tam, Mareike Moeller, Runpeng Luo, Zhenyan Luo, Ashley Jones, Sambasivam Periyannan, John P Rathjen, Benjamin Schwessinger

bioRxiv 2024.12.11.628074; doi: https://doi.org/10.1101/2024.12.11.628074 New Results

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Variant Set Distillation
Ryan Christ, Chul Joo Kang, Louis J.M. Aslett, Daniel Lam, Maria Faelth Savitski, Nathan Stitziel, David Steinsaltz, Ira Hall

bioRxiv 2024.12.06.627210; doi: https://doi.org/10.1101/2024.12.06.627210 New Results

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High-Resolution Transcriptional Impact of AIRE: Effects of Pathogenic Variants p.Arg257Ter, p.Cys311Tyr, and Polygenic Risk Variant p.Arg471Cys
Amund Holte Berger, Bergithe Eikeland Oftedal, Anette Susanne Bøe Wolff, Eystein Sverre Husebye, Per Morten Knappskog, Eirik Bratland, Stefan Johansson

bioRxiv 2024.12.09.627575; doi: https://doi.org/10.1101/2024.12.09.627575 New Results

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Machine learning reveals novel targets for both glioblastoma and osteosarcoma
Nan Li, Max Ward, Muniba Bashir, Yunpeng Cao, Amitava Datta, Zhaoyu Li, Shuang Zhang

bioRxiv 2024.11.05.622056; doi: https://doi.org/10.1101/2024.11.05.622056 New Results

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Single cell transcriptomics of X-ray irradiated Drosophila wing discs reveals heterogeneity related to cell-cycle status and cell location
Joyner Cruz, Willam Y. Sun, Alexandra Verbeke, Iswar K. Hariharan

bioRxiv 2024.12.10.627868; doi: https://doi.org/10.1101/2024.12.10.627868 New Results

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Chromosome-scale scaffolding of the fungus gnat genome (Diptera: Bradysia coprophila)
John M. Urban, Susan A. Gerbi, Allan C. Spradling

bioRxiv 2022.11.03.515061; doi: https://doi.org/10.1101/2022.11.03.515061 New Results

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Gut Microbiome Signatures During Acute Infection Predict Long COVID
Isin Y. Comba, Ruben A. T. Mars, Lu Yang, Mitchell Dumais, Jun Chen, Trena M. Van Gorp, Jonathan J. Harrington, Jason P. Sinnwell, Stephen Johnson, LaRinda A. Holland, Adam K. Khan, Efrem S. Lim, Christopher Aakre, Arjun P. Athreya, Georg K. Gerber, Jack C. O’Horo, Konstantinos N. Lazaridis, Purna C. Kashyap

bioRxiv 2024.12.10.626852; doi: https://doi.org/10.1101/2024.12.10.626852 New Results

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Alignment-Free Viral Sequence Classification at Scale
Daniel J. van Zyl, Marcel Dunaiski, Houriiyah Tegally, Cheryl Baxter, The INFORM Africa research study group, Tulio de Oliveira, Joicymara S. Xavier

bioRxiv 2024.12.10.627186; doi: https://doi.org/10.1101/2024.12.10.627186 New Results

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Genomics

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