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Genomics

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  • The Drosophila Dosage Compensation Complex activates target genes by chromosome looping within the active compartment
    Tamás Schauer, Yad Ghavi-Helm, Tom Sexton, Christian Albig, Catherine Regnard, Giacomo Cavalli, Eileen E M Furlong, Peter B Becker
    bioRxiv 101634; doi: https://doi.org/10.1101/101634
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  • Recurrent promoter mutations in melanoma are defined by an extended context-specific mutational signature
    Nils Johan Fredriksson, Kerryn Elliot, Stefan Filges, Anders Ståhlberg, Erik Larsson
    bioRxiv 069351; doi: https://doi.org/10.1101/069351
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  • Muscle transcriptome analysis reveals molecular pathways and biomarkers involved in extreme ultimate pH and meat defect occurrence in chicken
    Stéphane Beauclercq, Christelle Hennequet-Antier, Christophe Praud, Estelle Godet, Anne Collin, Sophie Tesseraud, Sonia Métayer-Coustard, Marie Bourin, Marco Moroldo, Frédéric Martins, Sandrine Lagarrigue, Elisabeth Le Bihan-Duval, Cécile Berri
    bioRxiv 101170; doi: https://doi.org/10.1101/101170
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  • Identification of genetic variants affecting vitamin D receptor binding and associations with autoimmune disease
    Giuseppe Gallone, Wilfried Haerty, Giulio Disanto, Sreeram Ramagopalan, Chris P. Ponting, Antonio J. Berlanga-Taylor
    bioRxiv 080143; doi: https://doi.org/10.1101/080143
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  • Phylogenomic Synteny Network Analysis Reveals an Ancient MADS-Box Transcription Factor Tandem Duplication and Lineage-Specific Transpositions
    Tao Zhao, Rens Holmer, Suzanne de Bruijn, Harrold A. van den Burg, M. Eric Schranz
    bioRxiv 100990; doi: https://doi.org/10.1101/100990
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  • Signs of host genetic regulation in the microbiome composition in cattle
    O. Gonzalez-Recio, I. Zubiria, A. García-Rodríguez, A. Hurtado, R. Atxaerandio
    bioRxiv 100966; doi: https://doi.org/10.1101/100966
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  • ARCS: Assembly Roundup by Chromium Scaffolding
    Sarah Yeo, Lauren Coombe, Justin Chu, René L Warren, Inanç Birol
    bioRxiv 100750; doi: https://doi.org/10.1101/100750
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  • Age-dependent changes in mean and variance of gene expression across tissues in a twin cohort
    Ana Viñuela, Andrew A Brown, Alfonso Buil, Pei-Chien Tsai, Matthew N Davies, Jordana T Bell, Emmanouil T Dermitzakis, Timothy D Spector, Kerrin S Small
    bioRxiv 063883; doi: https://doi.org/10.1101/063883
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  • Evaluating hybridization capture with RAD probes as a tool for museum genomics with historical bird specimens
    Ethan B. Linck, Zach Hanna, Anna Sellas, John P. Dumbacher
    bioRxiv 100867; doi: https://doi.org/10.1101/100867
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  • Transposons modulate transcriptomic and phenotypic variation via the formation of circular RNAs in maize
    Lu Chen, Pei Zhang, Yuan Fan, Juan Huang, Qiong Lu, Qing Li, Jianbing Yan, Gary J. Muehlbauer, Patrick S. Schnable, Mingqiu Dai, Lin Li
    bioRxiv 100578; doi: https://doi.org/10.1101/100578
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