Genomics

SVAPLSseq: A Method to correct for hidden sources of variability in differential gene expression studies based on RNAseq data
Sutirtha Chakraborty

bioRxiv 062125; doi: https://doi.org/10.1101/062125

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Loss of flight in the Galapagos cormorant mirrors human skeletal ciliopathies
Alejandro Burga, Weiguang Wang, Paul C. Wolf, Andrew M. Ramey, Claudio Verdugo, Karen Lyons, Patricia G. Parker, Leonid Kruglyak

bioRxiv 061432; doi: https://doi.org/10.1101/061432

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Forward genetic screen of human transposase genomic rearrangements
Anton G. Henssen, Eileen Jiang, Jiali Zhuang, Luca Pinello, Nicholas D. Socci, Richard Koche, Mithat Gonen, Camila M. Villasante, Scott A. Armstrong, Daniel E. Bauer, Zhiping Weng, Alex Kentsis

bioRxiv 061770; doi: https://doi.org/10.1101/061770

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Deep Sequencing of 10,000 Human Genomes
Amalio Telenti, Levi C.T. Pierce, William H. Biggs, Julia di Iulio, Emily H.M. Wong, Martin M. Fabani, Ewen F. Kirkness, Ahmed Moustafa, Naisha Shah, Chao Xie, Suzanne C. Brewerton, Nadeem Bulsara, Chad Garner, Gary Metzker, Efren Sandoval, Brad A. Perkins, Franz J. Och, Yaron Turpaz, J. Craig Venter

bioRxiv 061663; doi: https://doi.org/10.1101/061663

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A systematic comparison reveals substantial differences in chromosomal versus episomal encoding of enhancer activity
Fumitaka Inoue, Martin Kircher, Beth Martin, Gregory M. Cooper, Daniela M. Witten, Michael T. McManus, Nadav Ahituv, Jay Shendure

bioRxiv 061606; doi: https://doi.org/10.1101/061606

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Democratizing DNA Fingerprinting
Sophie Zaaijer, Assaf Gordon, Robert Piccone, Daniel Speyer, Yaniv Erlich

bioRxiv 061556; doi: https://doi.org/10.1101/061556

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Comparative Analysis of Single-Cell RNA Sequencing Methods
Christoph Ziegenhain, Beate Vieth, Swati Parekh, Björn Reinius, Martha Smets, Heinrich Leonhardt, Ines Hellmann, Wolfgang Enard

bioRxiv 035758; doi: https://doi.org/10.1101/035758

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Elucidating the genetic basis of an oligogenic birth defect using whole genome sequence data in a non-model organism, Bubalus bubalis
Lynsey K. Whitacre, Jesse L. Hoff, Robert D. Schnabel, Sara Albarella, Francesca Ciotola, Vincenzo Peretti, Francesco Strozzi, Chiara Ferrandi, Luigi Rammuno, Tad S. Sonstegard, John L. Williams, Jeremy F. Taylor, Jared E. Decker

bioRxiv 060996; doi: https://doi.org/10.1101/060996

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Enhancer sharing promotes neighborhoods of transcriptional regulation across eukaryotes
Porfirio Quintero-Cadena, Paul W. Sternberg

bioRxiv 061218; doi: https://doi.org/10.1101/061218

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Elucidating Combinatorial Chromatin States by Co-ImmunoPrecipitation (comb-ChIP)
Ronen Sadeh, Roee Launer-Wachs, Hava Wandel, Ayelet Rahat, Nir Friedman

bioRxiv 060962; doi: https://doi.org/10.1101/060962

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Genomics

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