Genomics

Accurate characterization of expanded tandem repeat length and sequence through whole genome long-read sequencing on PromethION.
Arne De Roeck, Wouter De Coster, Liene Bossaerts, Rita Cacace, Tim De Pooter, Jasper Van Dongen, Svenn D'Hert, Peter De Rijk, Mojca Strazisar, Christine Van Broeckhoven, Kristel Sleegers

bioRxiv 439026; doi: https://doi.org/10.1101/439026 New Results
Managing the Spatial Covariance of Genetic Diversity in Niemann-Pick C1 Through Modulation of the Hsp70 Chaperone System
Chao Wang, Samantha M Scott, Darren M Hutt, Pei Zhao, Hao Shao, Jason E Gestwicki, William E Balch

bioRxiv 437764; doi: https://doi.org/10.1101/437764 New Results
gwasurvivr: an R package for genome wide survival analysis
Abbas A Rizvi, Ezgi Karaesmen, Martin Morgan, Leah Preus, Junke Wang, Theresa Hahn, Michael Sovic, Lara Sucheston-Campbell

bioRxiv 326033; doi: https://doi.org/10.1101/326033 New Results
Sequence Imputation from Low Density Single Nucleotide Polymorphism Panel in a Black Poplar Breeding population
Marie Pegard, Odile Rogier, Aurélie Bérard, Patricia Faivre-Rampant, Marie-Christine Le Paslier, Catherine Bastien, Véronique Jorge, Leopoldo Sánchez

bioRxiv 437426; doi: https://doi.org/10.1101/437426 New Results
Building gene regulatory networks from single-cell ATAC-seq and RNA-seq using Linked Self-Organizing Maps
Camden Jansen, Ricardo Ramirez, Nicole El-Ali, David Gomez-Cabrero, Jesper Tegner, Matthias Merkenschlager, Ana Conesa, Ali Mortazavi

bioRxiv 438937; doi: https://doi.org/10.1101/438937 New Results
Analyses of Neanderthal introgression suggest that Levantine and southern Arabian populations have a shared population history
Deven N Vyas, Connie J Mulligan

bioRxiv 438390; doi: https://doi.org/10.1101/438390 New Results
Genome-wide transcription during early wheat meiosis is independent of synapsis, ploidy level and the Ph1 locus
Azahara C Martin, Philippa Borrill, Janet Higgins, Abdul Kader Alabdullah, Ricardo Ramirez-Gonzalez, David Swarbreck, Cristobal Uauy, Peter Shaw, Graham Moore

bioRxiv 437921; doi: https://doi.org/10.1101/437921 New Results
Population-scale study of eRNA transcription reveals bipartite functional enhancer architecture
Katla Kristjándsóttir, Yeonui Kwak, Nathaniel D Tippens, John T Lis, Hyun Min Kang, Hojoong Kwak

bioRxiv 426908; doi: https://doi.org/10.1101/426908 New Results
SMRT long reads and Direct Label and Stain optical maps allow the generation of a high-quality genome assembly for the European barn swallow (Hirundo rustica rustica)
Giulio Formenti, Matteo Chiara, Lucy Poveda, Kees-Jan Francoijs, Andrea Bonisoli-Alquati, Luca Canova, Luca Enrico Angelo Gianfranceschi, David Horner, Nicola Saino

bioRxiv 374512; doi: https://doi.org/10.1101/374512 New Results
Condensin II inactivation in interphase does not affect chromatin folding or gene expression
Nezar Abdennur, Wibke Schwarzer, Aleksandra Pekowska, Indra Alon Shaltiel, Wolfgang Huber, Christian H Haering, Leonid Mirny, Francois Spitz

bioRxiv 437459; doi: https://doi.org/10.1101/437459 New Results

Genomics

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