Genomics

Oxford Nanopore MinION sequencing enables rapid whole-genome assembly of Rickettsia typhi in a resource-limited setting
Ivo Elliott, Elizabeth M Batty, Damien Ming, Matthew T Robinson, Pruksa Nawtaisong, Mariateresa de Cesare, Paul N Newton, Rory Bowden

bioRxiv 292102; doi: https://doi.org/10.1101/292102 New Results
Rare, pathogenic germline variants in Fanconi Anemia genes increase risk for squamous lung cancer
Myvizhi Esai Selvan, Robert J Klein, Zeynep H Gumus

bioRxiv 269837; doi: https://doi.org/10.1101/269837 New Results
Mining unknown porcine protein isoforms by tissue-based map of proteome enhances the pig genome annotation
Pengju Zhao, Xianrui Zheng, Ying Yu, Zhuocheng Hou, Chenguang Diao, Haifei Wang, Huimin Kang, Chao Ning, Junhui Li, Wen Feng, Wen Wang, George E Liu, Bugao Li, Jacqueline Smith, Yangzom Chamba, Jian-Feng Liu

bioRxiv 391466; doi: https://doi.org/10.1101/391466 New Results
The genome of the soybean cyst nematode (Heterodera glycines) reveals complex patterns of duplications involved in the evolution of parasitism genes
Rick E Masonbrink, Thomas R Maier, Usha Muppirala, Arun S Seetharam, Etienne Lord, Parijat Juvale, Jeremy Schmutz, Nathan T Johnson, Dmitry Korkin, Melissa G. Mitchum, Benjamin Mimee, Sebastian Eves-van den Akker, Matthew Hudson, Andrew J Severin, Thomas J Baum

bioRxiv 391276; doi: https://doi.org/10.1101/391276 New Results
The genetics of the mood disorder spectrum: genome-wide association analyses of over 185,000 cases and 439,000 controls
Jonathan Coleman, Bipolar Disorder Working Group of the Psychiatric Genomics Consortium, Major Depressive Disorder Working Group of the Psychiatric Genomics Consortium, Gerome Breen

bioRxiv 383331; doi: https://doi.org/10.1101/383331 New Results
Genetic evidence that the latency III stage of Epstein-Barr Virus infection is a therapeutic target for Multiple Sclerosis
Ali Afrasiabi, Grant P Parnell, Nicole Fewings, Stephen D Schibeci, Monica A Basuki, Ramya Chandramohan, David A Brown, Sanjay Swaminathan, Fiona C McKay, Graeme J Stewart, David R Booth

bioRxiv 390609; doi: https://doi.org/10.1101/390609 New Results
Use of Hyperspectral Reflectance-Derived Relationship Matrices for Genomic Prediction of Grain Yield in Wheat
Margaret R Krause, Lorena González Pérez, José Crossa, Paulino Pérez-Rodríguez, Osval A. Montesinos-López, Ravi Singh, Susanne Dreisigacker, Jesse Poland, Jessica Rutkoski, Mark E Sorrells, Michael A. Gore, Suchismita Mondal

bioRxiv 389825; doi: https://doi.org/10.1101/389825 New Results
Whole genome sequencing and morphological analysis of the human-infecting schistosome emerging in Europe reveals a complex admixture between Schistosoma haematobium and Schistosoma bovis parasites.
Julien Kincaid-Smith, Alan Tracey, Ronaldo de Carvalo Augusto, Ingo Bulla, Nancy Holroyd, Anne Rognon, Olivier Rey, Cristian Chaparro, Ana Oleaga, Santiago Mas Coma, Jean-Francois Allienne, Christoph Grunau, Matthew Berriman, Jerome Boissier, Eve Toulza

bioRxiv 387969; doi: https://doi.org/10.1101/387969 New Results
SNP-ChIP: A versatile and tag-free method to quantify changes in protein binding across the genome
Luis A. Vale-Silva, Tovah E. Markowitz, Andreas Hochwagen

bioRxiv 390005; doi: https://doi.org/10.1101/390005 New Results
Joint single-cell DNA accessibility and protein epitope profiling reveals environmental regulation of epigenomic heterogeneity
Xingqi Chen, Ulrike Litzenburger, Yuning Wei, Alicia N. Schep, Edward L. LaGory, Hani Choudhry, Amato J. Giaccia, William J. Greenleaf, Howard Chang

bioRxiv 310359; doi: https://doi.org/10.1101/310359 New Results

Genomics

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