Genomics

Integrative analysis reveals RNA G-Quadruplexes in UTRs are selectively constrained and enriched for functional associations
David S.M. Lee, Louis R. Ghanem, Yoseph Barash

bioRxiv 666842; doi: https://doi.org/10.1101/666842 New Results
Rhizosphere metagenomics of mine tailings colonizing plants: assembling and selecting synthetic bacterial communities to enhance in situ bioremediation
Miguel Romero, Diana Gallego, Jazmin Blaz, Arely Lechuga, José F. Martínez, Hugo R. Barajas, Corina Hayano-Kanashiro, Mariana Peimbert, Rocío Cruz-Ortega, Francisco E. Molina-Freaner, Luis D. Alcaraz

bioRxiv 664805; doi: https://doi.org/10.1101/664805 New Results
Placental DNA methylation signatures of maternal smoking during pregnancy and potential impacts on fetal growth
Todd M. Everson, Marta Vives-Usano, Emie Seyve, Andres Cardenas, Marina Lacasaña, Jeffrey M. Craig, Corina Lesseur, Emily R. Baker, Nora Fernandez-Jimenez, Barbara Heude, Patrice Perron, Beatriz Gónzalez-Alzaga, Jane Halliday, Maya A. Deyssenroth, Margaret R. Karagas, Carmen Íñiguez, Luigi Bouchard, Pedro Carmona-Sáez, Yuk J. Loke, Ke Hao, Thalia Belmonte, Marie A. Charles, Jordi Martorell-Marugán, Evelyne Muggli, Jia Chen, Mariana F. Fernández, Jorg Tost, Antonio Gómez-Martín, Stephanie J. London, Jordi Sunyer, Carmen J. Marsit, Johanna Lepeule, Marie-France Hivert, Mariona Bustamante

bioRxiv 663567; doi: https://doi.org/10.1101/663567 New Results
Dissecting the binding mechanisms of transcription factors to DNA using a statistical thermodynamics framework.
Patrick C. N. Martin, Nicolae Radu Zabet

bioRxiv 666446; doi: https://doi.org/10.1101/666446 New Results
Characterizing the temporal dynamics of gene expression in single cells with sci-fate
Junyue Cao, Wei Zhou, Frank Steemers, Cole Trapnell, Jay Shendure

bioRxiv 666081; doi: https://doi.org/10.1101/666081 New Results
Genomic Environments and Their Influence on Transposable Element Communities
Brent Saylor, Stefan C. Kremer, T. Ryan Gregory, Karl Cottenie

bioRxiv 667121; doi: https://doi.org/10.1101/667121 New Results
Machine learning reveals bilateral distribution of somatic L1 insertions in human neurons and glia
Xiaowei Zhu, Bo Zhou, Reenal Pattni, Kelly Gleason, Chunfeng Tan, Agnieszka Kalinowski, Steven Sloan, Anna-Sophie Fiston-Lavier, Jessica Mariani, Brain Somatic Mosaicism Network, Alexej Abyzov, Dimitri Petrov, Ben A. Barres, Hannes Vogel, John V. Moran, Flora M. Vaccarino, Carol A. Tamminga, Douglas F. Levinson, Alexander E. Urban

bioRxiv 660779; doi: https://doi.org/10.1101/660779 New Results
G-quadruplexes sequester free heme in living cells
Lucas T. Gray, Emilia Puig Lombardi, Daniela Verga, Corinne Guetta, Alain Nicolas, Marie-Paule Teulade-Fichou, Arturo Londoño-Vallejo, Nancy Maizels

bioRxiv 652297; doi: https://doi.org/10.1101/652297 New Results
Differential Expression Gene Explorer (DrEdGE): A tool for generating interactive online data visualizations for exploration of quantitative transcript abundance datasets
Sophia C. Tintori, Patrick Golden, Bob Goldstein

bioRxiv 618439; doi: https://doi.org/10.1101/618439 New Results
Rapid response to the Alpha-1 Adrenergic Agent Phenylephrine in the Perioperative Period is Impacted by Genomics and Ancestry
Stephane Wenric, Janina M. Jeff, Thomas Joseph, Muh-Ching Yee, Gillian M. Belbin, Regeneron Genetics Center, CBIPM Genomics Group, Aniwaa Owusu Obeng, Stephen B. Ellis, Erwin P. Bottinger, Omri Gottesman, Matthew A. Levin, Eimear E. Kenny

bioRxiv 664961; doi: https://doi.org/10.1101/664961 New Results

Genomics

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