Genomics

Resequencing and association mapping of the generalist pathogen Botrytis cinerea
Susanna Atwell, Jason Corwin, Nicole Soltis, Wei Zhang, Daniel Copeland, Julie Feusier, Robert Eshbaugh, Daniel J Kliebenstein

bioRxiv 489799; doi: https://doi.org/10.1101/489799 New Results
Parent and offspring genotypes influence gene expression in early life
Daniel Newhouse, Margarida Barcelo Serra, Elaina Tuttle, Rusty Gonser, Christopher Balakrishnan

bioRxiv 488684; doi: https://doi.org/10.1101/488684 New Results
A meta-analysis of two high-risk prospective cohort studies reveals autism-specific transcriptional changes to chromatin, autoimmune, and environmental response genes in umbilical cord blood
Charles E Mordaunt, Bo Y Park, Kelly M Bakulski, Jason I Feinberg, Lisa A Croen, Christine Ladd-Acosta, Craig J Newschaffer, Heather E Volk, Sally Ozonoff, Irva Hertz-Picciotto, Janine M LaSalle, Rebecca J Schmidt, Daniele Fallin

bioRxiv 486498; doi: https://doi.org/10.1101/486498 New Results
Hfq Globally Binds and Destabilizes the bound sRNAs and mRNAs in Yersinia pestis
Han Yanping, Chen Dong, Yan Yanfeng, Wang Hongduo, Liu Zizhong, Xue Yaqiang, Yang Ruifu, Zhang Yi

bioRxiv 487769; doi: https://doi.org/10.1101/487769 New Results
Co-opted transposons help perpetuate conserved higher-order chromosomal structures
Mayank NK Choudhary, Ryan Z Friedman, Julia T Wang, Hyo Sik Jang, Xiaoyu Zhuo, Ting Wang

bioRxiv 485342; doi: https://doi.org/10.1101/485342 New Results
Evolution of pathogenic and nonpathogenic yeasts mitochondrial genomes inferred by supertrees and supermatrices with divergence estimates based on relaxed molecular clocks
Luciano R Lopes, Renata Carmona e Ferreira, Fernando Antoneli, Paulo B Paiva, Marcelo RS Briones

bioRxiv 486944; doi: https://doi.org/10.1101/486944 New Results
CompStor Novos: a low cost yet fast assembly-based variant calling for personal genomes
Travis Oenning, Taejeong Bae, Aravind Iyengar, Barrett Brickner, Madushanka Soysa, Nicholas Wright, Prasanth Kumar, Suneel Indupuru, Alexej Abyzov, Jonathan Coker

bioRxiv 486092; doi: https://doi.org/10.1101/486092 New Results
GA-repeats on mammalian X chromosomes support Ohno's hypothesis of dosage compensation by transcriptional upregulation
Edridge D'Souza, Elizaveta Hosage, Kathryn Weinand, Steve Gisselbrecht, Vicky Marktein, Peter Markstein, Martha Bulyk, Michele Markstein

bioRxiv 485300; doi: https://doi.org/10.1101/485300 New Results
Intertwined canonical and non-canonical initiation in dual promoters are pervasive and differentially regulate Polymerase II transcription
Chirag Nepal, Yavor Hadzhiev, Estefania Tarifeno-Saldivia, Ryan Cardenas, Ana-Maria Suzuki, Piero Carninci, Bernard Peers, Boris Lenhard, Jesper B Andersen, Ferenc Mueller

bioRxiv 487496; doi: https://doi.org/10.1101/487496 New Results
Topological Data Analysis of Single-cell Hi-C Contact Maps
Mathieu Carriere, Raul Rabadan

bioRxiv 486936; doi: https://doi.org/10.1101/486936 Confirmatory Results

Genomics

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