Genomics

The draft genome of an octocoral, Dendronephthya gigantea
Yeonsu Jeon, Seung Gu Park, Nayun Lee, Jessica A. Weber, Hui-Su Kim, Sung-Jin Hwang, Seonock Woo, Hak-min Kim, Youngjune Bhak, Sungwon Jeon, Nayoung Lee, Yejin Jo, Asta Blazyte, Taewoo Ryu, Yun Sung Cho, Hyunho Kim, Jung-Hyun Lee, Hyung-Soon Yim, Jong Bhak, Seungshic Yum

bioRxiv 487058; doi: https://doi.org/10.1101/487058 New Results
Shallow MinION sequencing to assist de novo assembly of the Streptococcus agalactiae genome
Tamara Hernandez-Beeftink, Hector Rodriguez-Perez, Ana Diaz-de Usera, Rafaela Gonzalez-Montelongo, Jose M. Lorenzo-Salazar, Fabian Lorenzo-Diaz, Carlos Flores

bioRxiv 485029; doi: https://doi.org/10.1101/485029 New Results
3D Chromatin Architecture Remodeling during Human Cardiomyocyte Differentiation Reveals A Novel Role of HERV-H In Demarcating Chromatin Domains
Yanxiao Zhang, Ting Li, Sebastian Preissl, Jonathan Grinstein, Elie Farah, Eugin Destici, Ah Young Lee, Sora Chee, Yunjiang Qiu, Kaiyue Ma, Zhen Ye, Quan Zhu, Hui Huang, Rong Hu, Rongxin Fang, Sylvia Evans, Neil Chi, Bing Ren

bioRxiv 485961; doi: https://doi.org/10.1101/485961 New Results
scPred: scPred: Cell type prediction at single-cell resolution
José Alquicira-Hernandez, Quan Nguyen, Joseph E Powell

bioRxiv 369538; doi: https://doi.org/10.1101/369538 New Results
Beyond the SNP threshold: identifying outbreak clusters using inferred transmissions
James Stimson, Jennifer Leigh Gardy, Barun Mathema, Valeriu Crudu, Theodore Cohen, Caroline Colijn

bioRxiv 319707; doi: https://doi.org/10.1101/319707 New Results
Genome-wide analysis of consistently RNA edited sites in human blood reveals interactions with mRNA processing genes and suggests correlations with cell types and biological variables.
Edoardo Giacopuzzi, Massimo Gennarelli, Chiara Sacco, Alice Filippini, Jessica Mingardi, Chiara Magri, Alessandro Barbon

bioRxiv 254045; doi: https://doi.org/10.1101/254045 New Results
Computational framework for targeted high-coverage sequencing based NIPT
Hindrek Teder, Priit Paluoja, Andres Salumets, Kaarel Krjutškov, Priit Palta

bioRxiv 486282; doi: https://doi.org/10.1101/486282 New Results
OCHROdb: a comprehensive, quality checked database of open chromatin regions from sequencing data
Parisa Shooshtari, Samantha Feng, Viswateja Nelakuditi, Justin Foong, Michael Brudno, Chris Cotsapas

bioRxiv 484840; doi: https://doi.org/10.1101/484840 New Results
PolyCRACKER, a robust method for the unsupervised partitioning of polyploid subgenomes by signatures of repetitive DNA evolution
Sean P Gordon, Joshua J Levy, John P Vogel

bioRxiv 484832; doi: https://doi.org/10.1101/484832 New Results
Ancient DNA from chewing gums connects material culture and genetics of Mesolithic hunter-gatherers in Scandinavia
Natalija Kashuba, Emrah Kirdök, Hege Damlien, Mikael A. Manninen, Bengt Nordqvist, Per Persson, Anders Götherström

bioRxiv 485045; doi: https://doi.org/10.1101/485045 New Results

Genomics

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