Genomics

Syntrichia ruralis: Emerging model moss genome reveals a conserved and previously unknown regulator of desiccation in flowering plants
Xiaodan Zhang, Jenna T. B. Ekwealor, Anderson T. Silva, Li’ang Yu, Andrea K. Jones, Brent D. Mishler, Andrew D. L. Nelson, Melvin J. Oliver

bioRxiv 2023.09.12.557352; doi: https://doi.org/10.1101/2023.09.12.557352 New Results

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Regulation of human interferon signaling by transposon exonization
Giulia Irene Maria Pasquesi, Holly Allen, Atma Ivancevic, Arturo Barbachano-Guerrero, Olivia Joyner, Kejun Guo, David M. Simpson, Keala Gapin, Isabella Horton, Lily Nguyen, Qing Yang, Cody J. Warren, Liliana D. Florea, Benjamin G. Bitler, Mario L. Santiago, Sara L. Sawyer, Edward B. Chuong

bioRxiv 2023.09.11.557241; doi: https://doi.org/10.1101/2023.09.11.557241 New Results

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Topologically associating domains can arise from stochastic folding of heterogeneous fluidlike chromatin
Luming Meng, Fu Kit Sheong, Qiong Luo

bioRxiv 2023.09.12.557077; doi: https://doi.org/10.1101/2023.09.12.557077 New Results

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Identification of inflammatory biomarkers in IgA nephropathy using the NanoString technology: a validation study
Laurence Gaumond, Caroline Lamarche, Stéphanie Beauchemin, Nathalie Henley, Naoual Elftouh, Casimiro Gerarduzzi, Louis-Philippe Laurin

bioRxiv 2023.09.11.556864; doi: https://doi.org/10.1101/2023.09.11.556864 New Results

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Alternative splicing and its regulation in the malaria vector Anopheles gambiae
Bárbara Díaz-Terenti, Elena Gómez-Díaz

bioRxiv 2023.07.18.549290; doi: https://doi.org/10.1101/2023.07.18.549290 New Results

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Unlocking the Genetic Landscape: Enhanced Insights into Sweet Sorghum Genomes through Comprehensive superTranscriptomic Analysis
Shinde Nikhil, Habeeb Shaikh Mohideen, NS Raja

bioRxiv 2023.09.10.557027; doi: https://doi.org/10.1101/2023.09.10.557027 New Results

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GoM DE: interpreting structure in sequence count data with differential expression analysis allowing for grades of membership
Peter Carbonetto, Kaixuan Luo, Abhishek Sarkar, Anthony Hung, Karl Tayeb, Sebastian Pott, Matthew Stephens

bioRxiv 2023.03.03.531029; doi: https://doi.org/10.1101/2023.03.03.531029 New Results

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Dynamic DNA methylation turnover in gene bodies is associated with enhanced gene expression plasticity in plants
Clara J. Williams, Dawei Dai, Kevin A. Tran, J. Grey Monroe, Ben P Williams

bioRxiv 2022.12.02.518885; doi: https://doi.org/10.1101/2022.12.02.518885 New Results

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Comparison of the three-dimensional chromatin structures of adolescent and adult peripheral blood B cells: implications for the study of pediatric autoimmune diseases
Kaiyu Jiang, Yao Fu, Jennifer A. Kelly, Patrick M. Gaffney, Lucy C. Holmes, James N. Jarvis

bioRxiv 2023.09.11.557171; doi: https://doi.org/10.1101/2023.09.11.557171 New Results

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Genetic tracing of market wildlife and viruses at the epicenter of the COVID-19 pandemic
Alexander Crits-Christoph, Joshua I. Levy, Jonathan E. Pekar, Stephen A. Goldstein, Reema Singh, Zach Hensel, Karthik Gangavarapu, Matthew B. Rogers, Niema Moshiri, Robert F. Garry, Edward C. Holmes, Marion P. G. Koopmans, Philippe Lemey, Saskia Popescu, Andrew Rambaut, David L. Robertson, Marc A. Suchard, Joel O. Wertheim, Angela L. Rasmussen, Kristian G. Andersen, Michael Worobey, Florence Débarre

bioRxiv 2023.09.13.557637; doi: https://doi.org/10.1101/2023.09.13.557637 New Results

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Genomics

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