Genomics

Differential expression feature extraction (DEFE) and its application in RNA-seq data analysis
Youlian Pan, Yifeng Li, Ziying Liu, Anuradha Surendra, Lipu Wang, Nora A. Foroud, Ravinder K. Goyal, Therese Ouellet, Pierre R. Fobert

bioRxiv 511188; doi: https://doi.org/10.1101/511188 New Results
Coordinated host-pathogen transcriptional dynamics revealed using sorted subpopulations and single, Candida albicans infected macrophages
Jose F Munoz, Toni Delorey, Christopher B Ford, Bi Yu Li, Dawn A Thompson, Reeta P Rao, Christina Cuomo

bioRxiv 350322; doi: https://doi.org/10.1101/350322 New Results
A blood-based prognostic biomarker in inflammatory bowel disease
Daniele Biasci, James C Lee, Nurulamin M Noor, Diana R Pombal, Nina Lewis, Tariq Ahmad, Ailsa Hart, Miles Parkes, Eoin F McKinney, Paul A Lyons, Kenneth GC Smith

bioRxiv 535153; doi: https://doi.org/10.1101/535153 New Results
Population history and gene divergence in Native Mexicans inferred from 76 human exomes
María C. Ávila-Arcos, Kimberly F. McManus, Karla Sandoval, Juan E. Rodríguez-Rodríguez, Alicia R. Martin, Pierre Luisi, Viridiana Villa-Islas, Rosenda I. Peñaloza-Espinosa, Celeste Eng, Scott Huntsman, Esteban G. Burchard, Christopher R. Gignoux, Carlos D. Bustamante, Andrés Moreno-Estrada

bioRxiv 534818; doi: https://doi.org/10.1101/534818 New Results
Capturing cell type-specific chromatin structural patterns by applying topic modeling to single-cell Hi-C data
Hyeon-Jin Kim, Galip Gurkan Yardimici, Giancarlo Bonora, Vijay Ramani, Jie Liu, Ruolan Qiu, Choli Lee, Jennifer Hesson, Carol B. Ware, Jay Shendure, Zhijun Duan, William Stafford Noble

bioRxiv 534800; doi: https://doi.org/10.1101/534800 New Results
Characterizing and comparing missense variants in monogenic disease and in cancer
Yizhou Yin, John Moult

bioRxiv 534693; doi: https://doi.org/10.1101/534693 New Results
Empowering conservation practice with efficient and economical genotyping from poor quality samples
Meghana Natesh, Ryan Taylor, Nathan Truelove, Elizabeth Hadly, Stephen Palumbi, Dmitri Petrov, Uma Ramakrishnan

bioRxiv 349472; doi: https://doi.org/10.1101/349472 New Results
A novel plasmid-transcribed regulatory sRNA, QfsR, controls chromosomal polycistronic mRNAs in Agrobacterium tumefaciens
Benjamin Diel, Magali Dequivre, Florence Wisniewski-Dyé, Ludovic Vial, Florence Hommais

bioRxiv 533729; doi: https://doi.org/10.1101/533729 New Results
Interplay of pericentromeric genome organization and chromatin landscape regulates the expression of Drosophila melanogaster heterochromatic genes
Parna Saha, Divya Tej Sowpati, Ishanee Srivastava, Rakesh Mishra

bioRxiv 534065; doi: https://doi.org/10.1101/534065 New Results
ClinGen Expert Clinical Validity Curation of 164 Hearing Loss Gene-Disease Pairs
Marina T DiStefano, Sarah E Hemphill, Andrea M Oza, Rebecca K Siegert, Andrea R Gant, Madeline Y Hughes, Brandon J Cushman, Hela Azaiez, Kevin T Booth, Alex Chapin, Hatice Duzkale, Tatsuo Matsunaga, Jun Shen, Wenying Zhang, Margaret Kenna, Lisa Schimmenti, Mustafa Tekin, Heidi L Rehm, Ahmad N Abou Tayoun, Sami S Amr, ClinGen Hearing Loss Clinical Domain Working Group

bioRxiv 534040; doi: https://doi.org/10.1101/534040 New Results

Genomics

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