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Genomics

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  • High-depth resequencing reveals hybrid population and insecticide resistance characteristics of fall armyworm (Spodoptera frugiperda) invading China
    Lei Zhang, Bo Liu, Weigang Zheng, Conghui Liu, Dandan Zhang, Shengyuan Zhao, Pengjun Xu, Kenneth Wilson, Amy Withers, Christopher M. Jones, Judith A. Smith, Gilson Chipabika, Donald L. Kachigamba, Kiwoong Nam, Emmanuelle d’Alençon, Bei Liu, Xinyue Liang, Minghui Jin, Chao Wu, Swapan Chakrabarty, Xianming Yang, Yuying Jiang, Jie Liu, Xiaolin Liu, Weipeng Quan, Guirong Wang, Wei Fan, Wanqiang Qian, Kongming Wu, Yutao Xiao
    bioRxiv 813154; doi: https://doi.org/10.1101/813154 New Results
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  • Assessing genomic diversity and signatures of selection in Original Braunvieh cattle using whole-genome sequencing data
    Meenu Bhati, Naveen Kumar Kadri, Danang Crysnanto, Hubert Pausch
    bioRxiv 703439; doi: https://doi.org/10.1101/703439 New Results
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  • Adventures in Multi-Omics I: Combining heterogeneous data sets via relationships matrices
    Deniz Akdemir, Julio Isidro Sanchéz
    bioRxiv 857425; doi: https://doi.org/10.1101/857425 New Results
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  • A limited set of transcriptional programs define major histological types and provide the molecular basis for a cellular taxonomy of the human body
    Alessandra Breschi, Manuel Muñoz-Aguirre, Valentin Wucher, Carrie A. Davis, Diego Garrido-Martín, Sarah Djebali, Jesse Gillis, Dmitri D. Pervouchine, Anna Vlasova, Alexander Dobin, Chris Zaleski, Jorg Drenkow, Cassidy Danyko, Alexandra Scavelli, Ferran Reverter, Michael P. Snyder, Thomas R. Gingeras, Roderic Guigó
    bioRxiv 857169; doi: https://doi.org/10.1101/857169 New Results
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  • Profiling of chromatin accessibility across Aspergillus species and identification of transcription factor binding sites in the Aspergillus genome using filamentous fungi ATAC-seq
    Lianggang Huang, Xuejie Li, Liangbo Dong, Bin Wang, Li Pan
    bioRxiv 857284; doi: https://doi.org/10.1101/857284 New Results
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  • Genomic features of asexual animals
    Kamil S. Jaron, Jens Bast, Reuben W. Nowell, T. Rhyker Ranallo-Benavidez, Marc Robinson-Rechavi, Tanja Schwander
    bioRxiv 497495; doi: https://doi.org/10.1101/497495 New Results
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  • Multi-site clonality analyses uncovers pervasive subclonal heterogeneity and branching evolution across melanoma metastases
    Roy Rabbie, Naser Ansari-Pour, Oliver Cast, Doreen Lau, Francis Scott, Sarah J. Welsh, Christine Parkinson, Leila Khoja, Luiza Moore, Mark Tullett, Kim Wong, Ingrid Ferreira, Julia M. Martínez Gómez, Mitchell Levesque, Ferdia A. Gallagher, Alejandro Jiménez-Sánchez, Laura Riva, Martin L. Miller, Kieren Allinson, Peter J. Campbell, Pippa Corrie, David C. Wedge, David J. Adams
    bioRxiv 848390; doi: https://doi.org/10.1101/848390 New Results
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  • The UCSC Repeat Browser allows discovery and visualization of evolutionary conflict across repeat families
    Jason D. Fernandes, Armando Zamudio-Hurtado, W. James Kent, David Haussler, Sofie R. Salama, Maximilian Haeussler
    bioRxiv 429613; doi: https://doi.org/10.1101/429613 New Results
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  • Discordant evolution of mitochondrial and nuclear yeast genomes at population level
    Matteo De Chiara, Anne Friedrich, Benjamin Barré, Michael Breitenbach, Joseph Schacherer, Gianni Liti
    bioRxiv 855858; doi: https://doi.org/10.1101/855858 New Results
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  • Dynamic Transcriptome, Accessible Genome and PGR Cistrome Profiles in the Human Myometrium
    San-Pin Wu, Matthew L. Anderson, Tianyuan Wang, Lecong Zhou, Olivia M. Emery, Xilong Li, Francesco J. DeMayo
    bioRxiv 806950; doi: https://doi.org/10.1101/806950 New Results
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