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Genomics

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  • Century-scale methylome stability in a recently diverged Arabidopsis thaliana lineage
    Jörg Hagmann, Claude Becker, Jonas Müller, Oliver Stegle, Rhonda C. Meyer, Korbinian Schneeberger, Joffrey Fitz, Thomas Altmann, Joy Bergelson, Karsten Borgwardt, Detlef Weigel
    bioRxiv 009225; doi: https://doi.org/10.1101/009225
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  • An introduction to LifeLines DEEP: study design and baseline characteristics
    Ettje F. Tigchelaar, Alexandra Zhernakova, Jackie A.M. Dekens, Gerben Hermes, Agnieszka Baranska, Zlatan Mujagic, Morris A. Swertz, Angélica M. Muñoz, Patrick Deelen, Maria C. Cénit, Lude Franke, Salome Scholtens, Ronald P. Stolk, Cisca Wijmenga, Edith J.M. Feskens
    bioRxiv 009217; doi: https://doi.org/10.1101/009217
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  • Probabilities of Fitness Consequences for Point Mutations Across the Human Genome
    Brad Gulko, Melissa J. Hubisz, Ilan Gronau, Adam Siepel
    bioRxiv 006825; doi: https://doi.org/10.1101/006825
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  • The Sea Lamprey Meiotic Map Resolves Ancient Vertebrate Genome Duplications
    Jeramiah J. Smith, Melissa C. Keinath
    bioRxiv 008953; doi: https://doi.org/10.1101/008953
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  • Generation of a Panel of Induced Pluripotent Stem Cells From Chimpanzees: a Resource for Comparative Functional Genomics
    Irene Gallego Romero, Bryan J. Pavlovic, Irene Hernando-Herraez, Nicholas E. Banovich, Courtney L. Kagan, Jonathan E. Burnett, Constance H. Huang, Amy Mitrano, Claudia I. Chavarria, Inbar Friedrich Ben-Nun, Yingchun Li, Karen Sabatini, Trevor Leonardo, Mana Parast, Tomas Marques-Bonet, Louise C. Laurent, Jeanne F. Loring, Yoav Gilad
    bioRxiv 008862; doi: https://doi.org/10.1101/008862
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  • Nuclear stability and transcriptional directionality separate functionally distinct RNA species
    Robin Andersson, Peter Refsing Andersen, Eivind Valen, Leighton J. Core, Jette Bornholdt, Mette Boyd, Torben Heick Jensen, Albin Sandelin
    bioRxiv 005447; doi: https://doi.org/10.1101/005447
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  • The Genetic Architecture of Gene Expression Levels in Wild Baboons
    Jenny Tung, Xiang Zhou, Susan C Alberts, Matthew Stephens, Yoav Gilad
    bioRxiv 008490; doi: https://doi.org/10.1101/008490
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  • Genome-wide Comparative Analysis Reveals Possible Common Ancestors of NBS Domain Containing Genes in Hybrid Citrus sinensis Genome and Original Citrus clementina Genome
    Yunsheng Wang, Lijuan Zhou, Dazhi Li, Amy Lawton-Rauh, Pradip K. Srimani, Liangying Dai, Yongping Duan, Feng Luo
    bioRxiv 008219; doi: https://doi.org/10.1101/008219
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  • The genomic landscape of polymorphic human nuclear mitochondrial insertions
    Gargi Dayama, Sarah B. Emery, Jeffrey M. Kidd, Ryan E. Mills
    bioRxiv 008144; doi: https://doi.org/10.1101/008144
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  • Genome sequencing of the perciform fish Larimichthys crocea provides insights into stress adaptation
    Jingqun Ao, Yinnan Mu, Li-Xin Xiang, DingDing Fan, MingJi Feng, Shicui Zhang, Qiong Shi, Lv-Yun Zhu, Ting Li, Yang Ding, Li Nie, Qiuhua Li, Wei-ren Dong, Liang Jiang, Bing Sun, XinHui Zhang, Mingyu Li, Hai-Qi Zhang, ShangBo Xie, YaBing Zhu, XuanTing Jiang, Xianhui Wang, Pengfei Mu, Wei Chen, Zhen Yue, Zhuo Wang, Jun Wang, Jian-Zhong Shao, Xinhua Chen
    bioRxiv 008136; doi: https://doi.org/10.1101/008136
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