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Genomics

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  • A novel homology-based algorithm for the identification of physically linked clusters of paralogous genes
    Juan F. Ortiz, Antonis Rokas
    bioRxiv 051953; doi: https://doi.org/10.1101/051953
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  • Brain Transcriptional Profiles of Male Alternative Reproductive Tactics and Females in Bluegill Sunfish
    Charlyn G. Partridge, Matthew D. MacManes, Rosemary Knapp, Bryan D. Neff
    bioRxiv 025916; doi: https://doi.org/10.1101/025916
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  • Capturing Evolutionary Signatures in Transcriptomes with myTAI
    Hajk-Georg Drost, Alexander Gabel, Tomislav Domazet-Lošo, Marcel Quint, Ivo Grosse
    bioRxiv 051565; doi: https://doi.org/10.1101/051565 Confirmatory Results
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  • A missense mutation in TUBD1 is associated with high juvenile mortality in Braunvieh and Fleckvieh cattle
    Hermann Schwarzenbacher, Johann Burgstaller, Franz R. Seefried, Christine Wurmser, Monika Hilbe, Simone Jung, Christian Fuerst, Nora Dinhopl, Herbert Weissenböeck, Birgit Fuerst-Waltl, Marlies Dolezal, Reinhard Winkler, Oskar Grueter, Ulrich Bleul, Thomas Wittek, Ruedi Fries, Hubert Pausch
    bioRxiv 041921; doi: https://doi.org/10.1101/041921
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  • Identification and qualification of 500 nuclear, single-copy, orthologous genes for the Eupulmonata (Gastropoda) using transcriptome sequencing and exon-capture
    Luisa C. Teasdale, Frank Köehler, Kevin D. Murray, Tim O’Hara, Adnan Moussalli
    bioRxiv 035543; doi: https://doi.org/10.1101/035543
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  • Approaches to estimating inbreeding coefficients in clinical isolates of Plasmodium falciparum from genomic sequence data
    Lucas Amenga-Etego, Ruiqi Li, John D. O’Brien
    bioRxiv 021519; doi: https://doi.org/10.1101/021519
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  • Probing the mechanisms of intron creation in a fast-evolving mite
    Scott William Roy
    bioRxiv 051292; doi: https://doi.org/10.1101/051292
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  • Mega-analysis of 31,396 individuals from 6 countries uncovers strong gene-environment interaction for human fertility
    Felix C. Tropf, Renske M. Verweij, Peter J. van der Most, Gert Stulp, Andrew Bakshi, Daniel A. Briley, Matthew Robinson, Anastasia Numan, Tõnu Esko, Andres Metspalu, Sarah E. Medland, Nicholas G. Martin, Harold Snieder, S. Hong Lee, Melinda C. Mills
    bioRxiv 049163; doi: https://doi.org/10.1101/049163
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  • LINES between species: Evolutionary dynamics of LINE-1 retrotransposons across the eukaryotic tree of life
    Atma M. Ivancevic, R. Daniel Kortschak, Terry Bertozzi, David L. Adelson
    bioRxiv 050880; doi: https://doi.org/10.1101/050880
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  • Global Genome Nucleotide Excision Repair is Organised into Domains Promoting Efficient DNA Repair in Chromatin
    Shirong Yu, Katie Evans, Patrick van Eijk, Mark Bennett, Richard M. Webster, Matthew Leadbitter, Yumin Teng, Raymond Waters, Stephen P. Jackson, Simon H. Reed
    bioRxiv 050807; doi: https://doi.org/10.1101/050807
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