Genomics

Hybridization Capture Using RAD Probes (hyRAD), a New Tool for Performing Genomic Analyses on Collection Specimens
Tomasz Suchan, Camille Pitteloud, Nadezhda S. Gerasimova, Anna Kostikova, Sarah Schmid, Nils Arrigo, Mila Pajkovic, Michał Ronikier, Nadir Alvarez

bioRxiv 025551; doi: https://doi.org/10.1101/025551

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A role for YY1 in sex-biased transcription revealed through X-linked promoter activity and allelic binding analyses
Chih-yu Chen, Wenqiang Shi, Allison M. Matthews, Yifeng Li, David J. Arenillas, Anthony Mathelier, Masayoshi Itoh, Hideya Kawaji, Timo Lassmann, FANTOM Consortium, Yoshihide Hayashizaki, Piero Carninci, Alistair R. R. Forrest, Carolyn J. Brown, Wyeth W. Wasserman

bioRxiv 044172; doi: https://doi.org/10.1101/044172

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A Whole Blood Molecular Signature for Acute Myocardial Infarction
Evan D Muse, Eric R Kramer, Haiying Wang, Paddy Barrett, Fereshteh Parviz, Mark A Novotny, Roger S Lasken, Timothy A Jatkoe, Glenn Oliveira, Hongfan Peng, Jerry Lu, Marc C Connelly, Kurt Schilling, Chandra Rao, Ali Torkamani, Eric J. Topol

bioRxiv 045013; doi: https://doi.org/10.1101/045013

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Whole Genome Analysis of 132 Clinical Saccharomyces cerevisiae Strains Reveals Extensive Ploidy Variation
Yuan O. Zhu, Gavin Sherlock, Dmitri A. Petrov

bioRxiv 044958; doi: https://doi.org/10.1101/044958

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Assemblytics: a web analytics tool for the detection of assembly-based variants
Maria Nattestad, Michael C Schatz

bioRxiv 044925; doi: https://doi.org/10.1101/044925

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Many long intergenic non-coding RNAs distally regulate mRNA gene expression levels
Ian C. McDowell, Athma A. Pai, Cong Guo, Christopher M. Vockley, Christopher D. Brown, Timothy E. Reddy, Barbara E. Engelhardt

bioRxiv 044719; doi: https://doi.org/10.1101/044719

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Evaluation of a Computational Diagnostic for Epistasis in Plant Breeding Populations
Reka Howard, William Beavis, Alicia Carriquiry

bioRxiv 044453; doi: https://doi.org/10.1101/044453 Confirmatory Results

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Three distinct velocities of elongating RNA polymerase define exons and introns
Qianqian Ye, Yoon Jung Kim, Hongyu Zhao, Tae Hoon Kim

bioRxiv 044123; doi: https://doi.org/10.1101/044123

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Formation of Chromosomal Domains in Interphase by Loop Extrusion
Geoffrey Fudenberg, Maxim Imakaev, Carolyn Lu, Anton Goloborodko, Nezar Abdennur, Leonid A. Mirny

bioRxiv 024620; doi: https://doi.org/10.1101/024620

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Exploratory analysis and error modeling of a sequencing technology
Michael Inouye, Kerrin S. Small, Yik Y. Teo, Heng Li, Nava Whiteford, Tom Skelly, Irina Abnizova, Daniel J. Turner, Panos Deloukas, Dominic P. Kwiatkowski, Clive G. Brown, Taane G. Clark

bioRxiv 043042; doi: https://doi.org/10.1101/043042

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Genomics

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