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Genomics

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  • Rapid evolution of female-biased genes among four species of Anopheles malaria mosquitoes
    Francesco Papa, Nikolai Windbichler, Robert M. Waterhouse, Alessia Cagnetti, Rocco D’Amato, Tania Presampieri, Mara K. N. Lawniczak, Tony Nolan, Philippos Aris Papathanos
    bioRxiv 081620; doi: https://doi.org/10.1101/081620 New Results
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  • Systematic comparison of monoclonal versus polyclonal antibodies for mapping histone modifications by ChIP-seq
    Michele Busby, Catherine Xue, Catherine Li, Yossi Farjoun, Elizabeth Gienger, Ido Yofe, Adrianne Gladden, Charles B. Epstein, Evan M. Cornett, Scott B. Rothbart, Chad Nusbaum, Alon Goren
    bioRxiv 054387; doi: https://doi.org/10.1101/054387
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  • A comparative study of metagenomics analysis pipelines at the species level
    Yee Voan Teo, Nicola Neretti
    bioRxiv 081141; doi: https://doi.org/10.1101/081141
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  • Integrated Genomic Analysis of Mitochondrial RNA Processing in Human Cancers
    Youssef Idaghdour, Alan Hodgkinson
    bioRxiv 080820; doi: https://doi.org/10.1101/080820
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  • Chironomus riparius (Diptera) genome sequencing reveals the impact of minisatellite transposable elements on population divergence
    Ann-Marie Oppold, Hanno Schmidt, Marcel Rose, Sören Lukas Hellmann, Florian Dolze, Fabian Ripp, Bettina Weich, Urs Schmidt-Ott, Erwin Schmidt, Robert Kofler, Thomas Hankeln, Markus Pfenninger
    bioRxiv 080721; doi: https://doi.org/10.1101/080721
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  • The genome of the crustacean Parhyale hawaiensis: a model for animal development, regeneration, immunity and lignocellulose digestion
    Damian Kao, Alvina G. Lai, Evangelia Stamataki, Silvana Rosic, Nikolaos Konstantinides, Erin Jarvis, Alessia Di Donfrancesco, Natalia Pouchkina-Stantcheva, Marie Sémon, Marco Grillo, Heather Bruce, Suyash Kumar, Igor Siwanowicz, Andy Le, Andrew Lemire, Michael B. Eisen, Cassandra Extavour, William E. Browne, Carsten Wolff, Michalis Averof, Nipam H. Patel, Peter Sarkies, Anastasios Pavlopoulos, A. Aziz Aboobaker
    bioRxiv 065789; doi: https://doi.org/10.1101/065789
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  • Genomics implicates adaptive and innate immunity in Alzheimer’s and Parkinson’s
    Sarah A Gagliano, Jennie G Pouget, John Hardy, Jo Knight, Michael R Barnes, Mina Ryten, Michael E Weale
    bioRxiv 059519; doi: https://doi.org/10.1101/059519
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  • Omics and bioinformatics approaches to target boar taint
    Rahul Agarwal, Jitendra Narayan
    bioRxiv 079301; doi: https://doi.org/10.1101/079301 Confirmatory Results
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  • Transcriptome from saffron (Crocus sativus) plants in Jammu and Kashmir reveals abundant soybean mosaic virus transcripts and several putative pathogen bacterial and fungal genera
    Sandeep Chakraborty
    bioRxiv 079186; doi: https://doi.org/10.1101/079186
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  • Transient structural variations have strong effects on quantitative traits and reproductive isolation in fission yeast
    Daniel C. Jeffares, Clemency Jolly, Mimoza Hoti, Doug Speed, Liam Shaw, Charalampos Rallis, Francois Balloux, Christophe Dessimoz, Jürg Bähler, Fritz J. Sedlazeck
    bioRxiv 047266; doi: https://doi.org/10.1101/047266
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