Immunology

A protocol for single-cell transcriptomics from cryopreserved renal tissue and urine for the Accelerating Medicine Partnership (AMP) RA/SLE network
Deepak A. Rao, Celine C. Berthier, Arnon Arazi, Anne Davidson, Yanyan Liu, Edward P. Browne, Thomas M. Eisenhaure, Adam Chicoine, David J. Lieb, Dawn E. Smilek, Patti Tosta, James A. Lederer, Michael B. Brenner, David Hildeman, E. Steve Woodle, David Wofsy, Jennifer H. Anolik, Matthias Kretzler, Nir Hacohen, Betty Diamond

bioRxiv 275859; doi: https://doi.org/10.1101/275859

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Perturbation of ubiquitin homeostasis promotes macrophage oxidative defenses
Marie-Eve Charbonneau, Karla D. Passalacqua, Susan E. Hagen, Hollis D. Showalter, Christiane E. Wobus, Mary X.D. O’Riordan

bioRxiv 276964; doi: https://doi.org/10.1101/276964

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Mitochondria-derived vesicles deliver antimicrobial payload to control phagosomal bacteria
Basel H. Abuaita, Tracey L. Schultz, Mary X. O’Riordan

bioRxiv 277004; doi: https://doi.org/10.1101/277004

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The fungal ligand chitin directly binds and signals inflammation dependent on oligomer size and TLR2
Katharina Fuchs, Yamel Cardona Gloria, Olaf-Oliver Wolz, Franziska Herster, Lokesh Sharma, Carly Dillen, Christoph Täumer, Sabine Dickhöfer, Zsofia Bittner, Truong-Minh Dang, Anurag Singh, Daniel Haischer, Maria A. Schlöffel, Kirsten J. Koymans, Tharmila Sanmuganantham, Milena Krach, Nadine A. Schilling, Felix Frauhammer, Lloyd Miller, Thorsten Nürnberger, Salomé LeibundGut-Landmann, Andrea A. Gust, Boris Macek, Martin Frank, Cécile Gouttefangeas, Charles S. Dela Cruz, Dominik Hartl, Alexander N.R. Weber

bioRxiv 270405; doi: https://doi.org/10.1101/270405

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Predicting the spectrum of TCR repertoire sharing with a data-driven model of recombination
Yuval Elhanati, Zachary Sethna, Curtis G. Callan Jr., Thierry Mora, Aleksandra M. Walczak

bioRxiv 275602; doi: https://doi.org/10.1101/275602

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Anti-HIV-1 B cell responses are dependent on B cell precursor frequency and antigen binding affinity
Pia Dosenovic, Ervin E. Kara, Anna-Klara Pettersson, Andrew McGuire, Matthew Gray, Harald Hartweger, Eddy S. Thientosapol, Leonidas Stamatatos, Michel C. Nussenzweig

bioRxiv 275438; doi: https://doi.org/10.1101/275438

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Perforin-2 Permeabilizes the Envelope of Phagocytosed Bacteria
Fangfang Bai, Ryan M. McCormack, Suzanne Hower, Gregory V. Plano, Mathias G. Lichtenheld, George P. Munson

bioRxiv 274878; doi: https://doi.org/10.1101/274878

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Differential expression of an alternative splice variant of IL-12Rβ1 impacts early dissemination in the mouse and associates with disease outcome in both mouse and humans exposed to tuberculosis
Mrinal K. Das, Aurelie A. Ray, Yi Cai, Akul Singhania, Christine M. Graham, Mingfeng Liao, Jeffrey J. Fountain, John E. Pearl, Manish Pareek, Pranab Haldar, Anne O’Garra, Xinchun Chen, Andrea M. Cooper

bioRxiv 271627; doi: https://doi.org/10.1101/271627

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Trends in CRP, D-dimer and fibrinogen during therapy for HIV associated multidrug resistant tuberculosis
Patrick G. T. Cudahy, Joshua L. Warren, Ted Cohen, Doug Wilson

bioRxiv 268367; doi: https://doi.org/10.1101/268367

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Previously Hidden Dynamics at the TCR-pMHC Interface Revealed
James Fodor, Blake T. Riley, Natalie A. Borg, Ashley M. Buckle

bioRxiv 223628; doi: https://doi.org/10.1101/223628

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Immunology

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