Immunology

TCR-H: Machine Learning Prediction of T-cell Receptor Epitope Binding on Unseen Datasets
Rajeshwar T. Rajitha, Omar Demerdash, Jeremy C. Smith

bioRxiv 2023.11.28.569077; doi: https://doi.org/10.1101/2023.11.28.569077 New Results

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Pathogenic IgE-fated B cell memory retains functional plasticity
Kelly Bruton, Allyssa Phelps, Atai Ariaz, Tina D. Walker, Jianping Wen, Sharon S. Khavkine-Binstock, Allison Fang, Olivia Mann-Delany, Niels Peter H. Knudsen, Siyon Gadkar, Emily Grydziuszko, Joshua F. E. Koenig, Aidan Gagnon, Susan Waserman, Peter S. Andersen, Manel Jordana

bioRxiv 2023.11.28.567094; doi: https://doi.org/10.1101/2023.11.28.567094 New Results

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The CD4 transmembrane GGXXG and juxtamembrane (C/F)CV+C motifs mediate pMHCII-specific signaling independently of CD4-LCK interactions
Mark S. Lee, Peter J. Tuohy, Caleb Y. Kim, Philip Yost, Katrina Lichauco, Heather L. Parrish, Koenraad Van Doorslaer, Michael S. Kuhns

bioRxiv 2023.05.05.539613; doi: https://doi.org/10.1101/2023.05.05.539613 New Results

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copepodTCR: Identification of Antigen-Specific T Cell Receptors with combinatorial peptide pooling
Vasilisa A. Kovaleva, David J. Pattinson, Carl Barton, Sarah R. Chapin, Anastasia A. Minervina, Katherine A. Richards, Andrea J. Sant, Paul G. Thomas, Mikhail V. Pogorelyy, Hannah V. Meyer

bioRxiv 2023.11.28.569052; doi: https://doi.org/10.1101/2023.11.28.569052 New Results

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Activating neutrophils by co-administration of immunogenic recombinant modified vaccinia virus Ankara and granulocyte colony-stimulating factor for the treatment of malignant peripheral nerve sheath tumor
Yueqi Wang, Shuaitong Liu, Juan Yan, Shanza Baseer-Tariq, Bharath Salla, Liangliang Ji, Ming Li, Ping Chi, Liang Deng

bioRxiv 2023.11.29.569123; doi: https://doi.org/10.1101/2023.11.29.569123 New Results

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Immune Responses in Checkpoint Myocarditis Across Heart, Blood, and Tumor
Steven M. Blum, Daniel A. Zlotoff, Neal P. Smith, Isabela J. Kernin, Swetha Ramesh, Leyre Zubiri, Joshua Caplin, Nandini Samanta, Sidney C. Martin, Alice Tirard, Pritha Sen, Yuhui Song, Jaimie Barth, Kamil Slowikowski, Mazen Nasrallah, Jessica Tantivit, Kasidet Manakongtreecheep, Benjamin Y. Arnold, John McGuire, Christopher J. Pinto, Daniel McLoughlin, Monica Jackson, PuiYee Chan, Aleigha Lawless, Tatyana Sharova, Linda T. Nieman, Justin F. Gainor, Dejan Juric, Mari Mino-Kenudsen, Ryan J. Sullivan, Genevieve M. Boland, James R. Stone, Molly F. Thomas, Tomas G. Neilan, Kerry L. Reynolds, Alexandra-Chloé Villani

bioRxiv 2023.09.15.557794; doi: https://doi.org/10.1101/2023.09.15.557794 New Results

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An mRNA-encoded, long-lasting Interleukin-2 restores CD8⁺ T cell neoantigen immunity in MHC class I-deficient cancers
Jan D. Beck, Mustafa Diken, Martin Suchan, Michael Streuber, Elif Diken, Laura Kolb, Lisa Allnoch, Fulvia Vascotto, Daniel Peters, Tim Beißert, Özlem Türeci, Sebastian Kreiter, Mathias Vormehr, Ugur Sahin

bioRxiv 2023.07.18.549445; doi: https://doi.org/10.1101/2023.07.18.549445 New Results

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A novel MARV glycoprotein-specific antibody with potentials of broad-spectrum neutralization to filovirus
Yuting Zhang, Min Zhang, Haiyan Wu, Xinwei Wang, Hang Zheng, Junjuan Feng, Jing Wang, Longlong Luo, He Xiao, Chunxia Qiao, Xinying Li, Yuanqiang Zheng, Weijin Huang, Youchun Wang, Yi Wang, Yanchun Shi, Jiannan Feng, Guojiang Chen

bioRxiv 2023.09.17.558100; doi: https://doi.org/10.1101/2023.09.17.558100 New Results

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BCG vaccination impacts the epigenetic landscape of progenitor cells in human bone marrow
Sarah J. Sun, Raúl Aguirre-Gamboa, L. Charlotte J. de Bree, Joaquin Sanz, Anne Dumaine, Leo A.B. Joosten, Maziar Divangahi, Mihai G. Netea, Luis B. Barreiro

bioRxiv 2023.11.28.569076; doi: https://doi.org/10.1101/2023.11.28.569076 New Results

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Interpretable Inflammation Landscape of Circulating Immune cells
Laura Jiménez-Gracia, Davide Maspero, Sergio Aguilar-Fernández, Francesco Craighero, Sara Ruiz, Domenica Marchese, Ginevra Caratù, Marc Elosua-Bayes, Mohamed Abdalfatah, Angela Sanzo-Machuca, Ana M. Corraliza, Ramon Massoni-Badosa, Hoang A. Tran, Rachelly Normand, Jacquelyn Nestor, Yourae Hong, Tessa Kole, Petra van der Velde, Frederique Alleblas, Flaminia Pedretti, Adrià Aterido, Martin Banchero, German Soriano, Eva Román, Maarten van den Berge, Azucena Salas, Jose Manuel Carrascosa, Antonio Fernández Nebro, Eugeni Domènech, Juan Cañete, Jesús Tornero, Javier Pérez-Gisbert, Ernest Choy, Giampiero Girolomoni, Britta Siegmund, Antonio Julià, Violeta Serra, Roberto Elosua, Sabine Tejpar, Silvia Vidal, Martijn C. Nawijn, Sara Marsal, Pierre Vandergheynst, Alexandra-Chloé Villani, Juan C. Nieto, Holger Heyn

bioRxiv 2023.11.28.568839; doi: https://doi.org/10.1101/2023.11.28.568839 New Results

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Immunology

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