Microbiology

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May the phage be with you? Prophage-like elements in the genomes of Soft Rot Pectobacteriaceae (Pectobacterium spp. and Dickeya spp.)
Robert Czajkowski

bioRxiv 399675; doi: https://doi.org/10.1101/399675

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Simulation of enteric colonisation by and screening for Carbapenemase Producing Enterobacteriaceae using an in-vitro human gut model
bioRxiv 399170; doi: https://doi.org/10.1101/399170

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Identification of a cis-acting determinant limiting expression of sphingomyelinase gene sph2 in Leptospira interrogans with a gfp reporter plasmid
James Matsunaga, David A. Haake

bioRxiv 400259; doi: https://doi.org/10.1101/400259

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Reference Set of Mycobacterium tuberculosis Clinical Strains: A tool for research and product development
Sonia Borrell, Andrej Trauner, Daniela Brites, Leen Rigouts, Chloe Loiseau, Mireia Coscolla, Stefan Niemann, Bouke De Jong, Dorothy Yeboah-Manu, Midori Kato-Maeda, Julia Feldmann, Miriam Reinhard, Christian Beisel, Sebastien Gagneux

bioRxiv 399709; doi: https://doi.org/10.1101/399709

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Hemagglutinin stalk-reactive antibodies interfere with influenza virus neuraminidase activity by steric hindrance
Yao-Qing Chen, Linda Yu-Ling Lan, Min Huang, Carole Henry, Patrick C. Wilson

bioRxiv 400036; doi: https://doi.org/10.1101/400036

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Therapeutic effects of favipiravir against severe fever with thrombocytopenia syndrome virus infection in a lethal mouse model: dose-efficacy studies upon oral administration
Hideki Tani, Takashi Komeno, Aiko Fukuma, Shuetsu Fukushi, Satoshi Taniguchi, Masayuki Shimojima, Akihiko Uda, Shigeru Morikawa, Nozomi Nakajima, Yousuke Furuta, Masayuki Saijo

bioRxiv 399899; doi: https://doi.org/10.1101/399899

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Large scale changes in host methylation patterns induced by IncA/C plasmid transformation in Vibrio cholerae
Ruibai Wang, Kanglin Wan

bioRxiv 399964; doi: https://doi.org/10.1101/399964

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Characterization of emetic and diarrheal Bacillus cereus strains from a 2016 foodborne outbreak using whole-genome sequencing: addressing the microbiological, epidemiological, and bioinformatic challenges
Laura M. Carroll, Martin Wiedmann, Manjari Mukherjee, David C. Nicholas, Lisa A. Mingle, Nellie B. Dumas, Jocelyn A. Cole, Jasna Kovac

bioRxiv 399287; doi: https://doi.org/10.1101/399287

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Short Term Evolutionary Dynamics of Escherichia Coli in Different Carbon Environments
Debika Choudhury, Supreet Saini

bioRxiv 398578; doi: https://doi.org/10.1101/398578

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Calicivirus VP2 forms a portal to mediate endosome escape
Michaela Conley, Marion McElwee, Liyana Azmi, Mads Gabrielsen, Olwyn Byron, Ian G. Goodfellow, David Bhella

bioRxiv 397901; doi: https://doi.org/10.1101/397901

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