Molecular Biology

Quantitative analysis of transcription start site selection in Saccharomyces cerevisiae reveals control by DNA sequence, RNA Polymerase II activity, and NTP levels
Yunye Zhu, Irina O. Vvedenskaya, Sing-Hoi Sze, Bryce E. Nickels, Craig D. Kaplan

bioRxiv 2021.11.09.467992; doi: https://doi.org/10.1101/2021.11.09.467992 New Results

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Discovery of anti-SARS-CoV-2 molecules using structure-assisted repurposing approach targeting N-protein
Preeti Dhaka, Ankur Singh, Shweta Choudhary, Pravindra Kumar, Gaurav Kumar Sharma, Shailly Tomar

bioRxiv 2022.03.12.484092; doi: https://doi.org/10.1101/2022.03.12.484092 New Results

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Unistrand piRNA clusters are an evolutionary conserved mechanism to suppress endogenous retroviruses across the Drosophila genus
Jasper van Lopik, Maria-Anna Trapotsi, Gregory J. Hannon, Susanne Bornelöv, Benjamin Czech Nicholson

bioRxiv 2023.02.27.530199; doi: https://doi.org/10.1101/2023.02.27.530199 New Results

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Ready-to-use nanopore platform for ethanolamine quantification using an aptamer-based strand displacement assay
Isabel Quint, Jonathan Simantzik, Lars Kaiser, Stefan Laufer, Rene’ Csuk, David Smith, Matthias Kohl, Hans-Peter Deigner

bioRxiv 2023.02.27.530168; doi: https://doi.org/10.1101/2023.02.27.530168 New Results

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Atomic resolution structure of a DNA-binding histone protein from the bacterium Bdellovibrio bacteriovorus
Yimin Hu, Silvia Deiss, Joe D. Joiner, Marcus D. Hartmann, Andrei N. Lupas, Birte Hernandez Alvarez, Vikram Alva

bioRxiv 2023.02.26.530074; doi: https://doi.org/10.1101/2023.02.26.530074 New Results

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Coding-sequence evolution does not explain divergence in petal anthocyanin pigmentation between Mimulus luteus var. luteus and M. l. variegatus
Walker E. Orr, Ji Yang Kim, Tejas Raj, Ellen K. Hom, Ashley E. Person, Anne Vonada, John A. Stratton, Arielle M. Cooley

bioRxiv 2022.12.11.519905; doi: https://doi.org/10.1101/2022.12.11.519905 New Results

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Thiolutin is a direct inhibitor of RNA Polymerase II
Chenxi Qiu, Indranil Malik, Payal Arora, Amber J. Laperuta, Emily M. Pavlovic, Scott Ugochukwu, Mandar Naik, Craig Kaplan

bioRxiv 2021.05.05.442806; doi: https://doi.org/10.1101/2021.05.05.442806 New Results

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Rapid and sensitive detection of native glycoRNAs
Helena Hemberger, Peiyuan Chai, Charlotta G. Lebedenko, Reese M. Caldwell, Benson M. George, Ryan A. Flynn

bioRxiv 2023.02.26.530106; doi: https://doi.org/10.1101/2023.02.26.530106 New Results

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Improving retinal vascular endothelial cell tropism through rational rAAV capsid design
Ramesh Periasamy, Dwani D. Patel, Sanford L. Boye, Shannon E. Boye, Daniel M. Lipinski

bioRxiv 2023.02.26.530096; doi: https://doi.org/10.1101/2023.02.26.530096 New Results

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Substantial Downregulation of Mitochondrial and Peroxisomal Proteins during Acute Kidney Injury revealed by Data-Independent Acquisition Proteomics
Jordan B. Burton, Anne Silva-Barbosa, Joanna Bons, Jacob Rose, Katherine Pfister, Fabia Simona, Tejas Gandhi, Lukas Reiter, Oliver Bernhardt, Christie L. Hunter, Eric S Goetzman, Sunder Sims-Lucas, Birgit Schilling

bioRxiv 2023.02.26.530107; doi: https://doi.org/10.1101/2023.02.26.530107 New Results

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Molecular Biology

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