Synthetic Biology

The NK Landscape as a Versatile Benchmark for Machine Learning Driven Protein Engineering
Adam C. Mater, Mahakaran Sandhu, Colin Jackson

bioRxiv 2020.09.30.319780; doi: https://doi.org/10.1101/2020.09.30.319780

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Discovery of tREP-18, a novel class of tRNA encoded peptide with potent leishmanicidal activity
Amrita Chakrabarti, Monika Kaushik, Juveria Khan, Deepanshu Soota, P Kalairasan, Sunil Saini, Siddharth Manvati, Jhalak Singhal, Anand Ranganathan, Soumya Pati, Pawan K. Dhar, Shailja Singh

bioRxiv 2020.10.04.325217; doi: https://doi.org/10.1101/2020.10.04.325217

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Testing theoretical minimal genomes using whole-cell models
Joshua Rees-Garbutt, Jake Rightmyer, Oliver Chalkley, Lucia Marucci, Claire Grierson

bioRxiv 2020.03.26.010363; doi: https://doi.org/10.1101/2020.03.26.010363

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Model-guided design of mammalian genetic programs
Joseph J. Muldoon, Viswajit Kandula, Mihe Hong, Patrick S. Donahue, Jonathan D. Boucher, Neda Bagheri, Joshua N. Leonard

bioRxiv 2020.09.30.320853; doi: https://doi.org/10.1101/2020.09.30.320853

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Engineering supramolecular organizing centers for optogenetic control of innate immune responses
Peng Tan, Lian He, Yubin Zhou

bioRxiv 2020.09.29.317776; doi: https://doi.org/10.1101/2020.09.29.317776

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Reprogramming Epiblast Stem Cells into Pre-Implantation Blastocyst Cell-like Cells
Kiichiro Tomoda, Haiming Hu, Yoshiki Sahara, Hashimita Sanyal, Minoru Takasato, Cody Kime

bioRxiv 2020.09.29.318279; doi: https://doi.org/10.1101/2020.09.29.318279

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A empirical comparison of preservation methods for synthetic DNA data storage
Lee Organick, Bichlien H. Nguyen, Rachel McAmis, Weida D. Chen, A. Xavier Kohll, Siena Dumas Ang, Robert N. Grass, Luis Ceze, Karin Strauss

bioRxiv 2020.09.19.304014; doi: https://doi.org/10.1101/2020.09.19.304014

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Synthetic auxotrophy remains stable after continuous evolution and in co-culture with mammalian cells
Aditya M. Kunjapur, Michael G. Napolitano, Eriona Hysolli, Karen Noguera, Evan M. Appleton, Max G. Schubert, Michaela A. Jones, Siddharth Iyer, Daniel J. Mandell, George M. Church

bioRxiv 2020.09.27.315804; doi: https://doi.org/10.1101/2020.09.27.315804

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Mapping the Functional Landscape of the Receptor Binding Domain of T7 Bacteriophage by Deep Mutational Scanning
Phil Huss, Anthony Meger, Megan Leander, Kyle Nishikawa, Srivatsan Raman

bioRxiv 2020.07.28.225284; doi: https://doi.org/10.1101/2020.07.28.225284

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Robust Self-Regeneratable Stiff Living Materials
Avinash Manjula-Basavanna, Anna Duraj-Thatte, Neel S. Joshi

bioRxiv 2020.09.24.311589; doi: https://doi.org/10.1101/2020.09.24.311589

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Synthetic Biology

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