Systems Biology

Optimizing checkpoint strategies based on first principles predicts experimental DNA damage checkpoint override times
Ahmad Sadeghi, Roxane Dervey, Vojislav Gligorovski, Sahand Jamal Rahi

bioRxiv 2020.08.14.251504; doi: https://doi.org/10.1101/2020.08.14.251504 New Results

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Probabilistic Thermodynamic Analysis of Metabolic Networks
Mattia Guglielmo Gollub, Hans-Michael Kaltenbach, Joerg Stelling

bioRxiv 2020.08.14.250845; doi: https://doi.org/10.1101/2020.08.14.250845 New Results

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Fibroblast Mechanotransduction Network Predicts Targets for Mechano-Adaptive Infarct Therapies
Jesse D Rogers, William Richardson

bioRxiv 2020.08.13.250001; doi: https://doi.org/10.1101/2020.08.13.250001 New Results

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iModulonDB: a knowledgebase of microbial transcriptional regulation derived from machine learning
Kevin Rychel, Katherine Decker, Anand V Sastry, Patrick V Phaneuf, Saugat Poudel, Bernhard O Palsson

bioRxiv 2020.08.13.250159; doi: https://doi.org/10.1101/2020.08.13.250159 New Results

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Listen to the noise: identifiability analysis for stochastic differential equation models in systems biology
Alexander P Browning, David James Warne, Kevin Burrage, Ruth E Baker, Matthew J Simpson

bioRxiv 2020.08.10.245233; doi: https://doi.org/10.1101/2020.08.10.245233 New Results

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Light-mediated discovery of surfaceome nanoscale organization and intercellular receptor interaction networks
Maik Müller, Fabienne Gräbnitz, Niculò Barandun, Yang Shen, Stefan U. Vetterli, Milon Mondal, James R. Prudent, Yannik Severin, Marc van Oostrum, Raphael Hofmann, Roman Sarott, Alexey I. Nesvizhskii, Erick M. Carreira, Jeffrey Bode, Berend Snijder, John A. Robinson, Martin J. Loessner, Annette Oxenius, Bernd Wollscheid

bioRxiv 2020.08.11.246652; doi: https://doi.org/10.1101/2020.08.11.246652 New Results

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A semi-supervised Bayesian approach for simultaneous protein sub-cellular localisation assignment and novelty detection
Oliver M. Crook, Aikaterini Geladaki, Daniel J.H. Nightingale, Owen Vennard, Kathryn S. Lilley, Laurent Gatto, Paul D.W. Kirk

bioRxiv 2020.05.05.078345; doi: https://doi.org/10.1101/2020.05.05.078345 New Results

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Dynamic bistable switches enhance robustness and accuracy of cell cycle transitions
Jan Rombouts, Lendert Gelens

bioRxiv 2020.08.11.246017; doi: https://doi.org/10.1101/2020.08.11.246017 New Results

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Mapping multicellular programs from single-cell profiles
Livnat Jerby-Arnon, Aviv Regev

bioRxiv 2020.08.11.245472; doi: https://doi.org/10.1101/2020.08.11.245472 New Results

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Dynamic landscape of protein occupancy across the Escherichia coli chromosome
Peter L. Freddolino, Thomas J. Goss, Haley M. Amemiya, Saeed Tavazoie

bioRxiv 2020.01.29.924811; doi: https://doi.org/10.1101/2020.01.29.924811 New Results

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Systems Biology

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