Systems Biology

A CRISPR-Cas9 Genome Engineering Platform in Primary CD4+ T Cells for the Interrogation of HIV Host Factors
Judd F. Hultquist, Joseph Hiatt, Kathrin Schumann, Michael J. McGregor, Theodore L. Roth, Paige Haas, Jennifer Doudna, Alexander Marson, Nevan J. Krogan

bioRxiv 205500; doi: https://doi.org/10.1101/205500 New Results
Massively parallel single cell lineage tracing using CRISPR/Cas9 induced genetic scars
Bastiaan Spanjaard, Bo Hu, Nina Mitic, Jan Philipp Junker

bioRxiv 205971; doi: https://doi.org/10.1101/205971 New Results
Accurate, Sensitive, and Precise Multiplexed Proteomics using the Complement Reporter Ion Cluster
Matthew Sonnett, Eyan Yeung, Martin Wuhr

bioRxiv 205054; doi: https://doi.org/10.1101/205054 New Results
Two coupled feedback loops explain random mono-allelic Xist upregulation at the onset of X-chromosome inactivation
Verena Mutzel, Ikuhiro Okamoto, Ilona Dunkel, Mitinori Saitou, Luca Giorgetti, Edith Heard, Edda G. Schulz

bioRxiv 204909; doi: https://doi.org/10.1101/204909 New Results
Deciphering the regulation mechanism in biochemical networks by a systems-biology approach
Bernardo Mello, Yuhai Tu

bioRxiv 203901; doi: https://doi.org/10.1101/203901 New Results
A duplex MIPs-based biological-computational cell lineage discovery platform
Liming Tao, Ofir Raz, Zipora Marx, Tamir Biezuner, Shiran Amir, Lilach Milo, Rivka Adar, Amos Onn, Noa Chapal-Ilani, Veronika Berman, Ron Levy, Barak Oron, Ehud Shapiro

bioRxiv 191296; doi: https://doi.org/10.1101/191296 New Results
Functional pathways for metabolic network-based data analysis: the MetPath algorithm
Gianluca Mattei, Daniel C. Zielinski, Zhuohui Gan, Matteo Ramazzotti, Bernhard O. Palsson

bioRxiv 202226; doi: https://doi.org/10.1101/202226 New Results
Gene set enrichment analysis using RNA-seq-based condition-specific metabolic networks
Van Du T Tran, Sébastien Moretti, Alix T Coste, Sara Amorim-Vaz, Dominique Sanglard, Marco Pagni

bioRxiv 200964; doi: https://doi.org/10.1101/200964 New Results
Origins of fractional control in regulated cell death
Luis C Santos, Robert Vogel, Jerry E Chipuk, Marc R Birtwistle, Gustavo Stolovitzky, Pablo Meyer

bioRxiv 201160; doi: https://doi.org/10.1101/201160 New Results
Tree-ensemble analysis tests for presence of multifurcations in single cell data
Will Macnair, Laura De Vargas Roditi, Stefan Ganscha, Manfred Claassen

bioRxiv 200923; doi: https://doi.org/10.1101/200923 New Results

Systems Biology

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