Systems Biology

The Beacon Calculus: A formal method for the flexible and concise modelling of biological systems
Michael A. Boemo, Luca Cardelli, Conrad A. Nieduszynski

bioRxiv 579029; doi: https://doi.org/10.1101/579029 New Results

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Metabolite sequestration enables rapid recovery from nutrient depletion
Christopher J. Hartline, Ahmad A. Mannan, Di Liu, Fuzhong Zhang, Diego A. Oyarzún

bioRxiv 590943; doi: https://doi.org/10.1101/590943 New Results

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Predicting mechanism of action of cellular perturbations with pathway activity signatures
Yan Ren, Siva Sivaganesan, Nicholas A. Clark, Lixia Zhang, Jacek Biesiada, Wen Niu, David R. Plas, Mario Medvedovic

bioRxiv 705228; doi: https://doi.org/10.1101/705228 New Results

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Single rod-shaped cell fluctuations from stochastic surface/volume growth rates
Orso Maria Romano, Marco Cosentino-Lagomarsino

bioRxiv 852624; doi: https://doi.org/10.1101/852624 New Results

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Identifying inhibitors of epithelial-mesenchymal plasticity using a network topology based approach
Kishore Hari, Burhanuddin Sabuwala, Balaram Vishnu Subramani, Caterina La Porta, Stefano Zapperi, Francesc Font-Clos, Mohit Kumar Jolly

bioRxiv 854307; doi: https://doi.org/10.1101/854307 New Results

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Designing combination therapies using multiple optimal controls
Jesse A Sharp, Alexander P Browning, Tarunendu Mapder, Christopher M Baker, Kevin Burrage, Matthew J Simpson

bioRxiv 850693; doi: https://doi.org/10.1101/850693 New Results

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Enhancing network activation in Natural Killer cells: Predictions from in silico modeling
Sahak Z. Makaryan, Stacey D. Finley

bioRxiv 395756; doi: https://doi.org/10.1101/395756 New Results

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Network analysis reveals a distinct axis of macrophage activation in response to conflicting inflammatory cues
Xiaji Liu, Jingyuan Zhang, Angela C. Zeigler, Anders R. Nelson, Merry L. Lindsey, Jeffrey J. Saucerman

bioRxiv 844464; doi: https://doi.org/10.1101/844464 New Results

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Statistical inference of mechanistic models from qualitative data using an efficient optimal scaling approach
Leonard Schmiester, Daniel Weindl, Jan Hasenauer

bioRxiv 848648; doi: https://doi.org/10.1101/848648 New Results

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Hearing impairment due to Mir183/96/182 mutations suggests both loss and gain of function effects
Morag A. Lewis, Francesca Di Domenico, Neil J. Ingham, Haydn M. Prosser, Karen P. Steel

bioRxiv 579003; doi: https://doi.org/10.1101/579003 New Results

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Systems Biology

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