Systems Biology

Control Theory Concepts for Modeling Uncertainty in Enzyme Kinetics of Biochemical Networks
Ljubisa Miskovic, Milenko Tokic, Georgios Savoglidis, Vassily Hatzimanikatis

bioRxiv 618777; doi: https://doi.org/10.1101/618777 New Results
Collective intelligence defines biological functions in Wikipedia as communities in the hidden protein connection network
Andrei Zinovyev, Urszula Czerwinska, Laura Cantini, Emmanuel Barillot, Klaus M. Frahm, Dima L. Shepelyansky

bioRxiv 618447; doi: https://doi.org/10.1101/618447 New Results
Differential Metabolic and Multi-tissue Transcriptomic Responses to Fructose Consumption among Genetically Diverse Mice
Guanglin Zhang, Hyae Ran Byun, Zhe Ying, Montgomery Blencowe, Yuqi Zhao, Jason Hong, Le Shu, Karthick Chella Krishnan, Fernando Gomez-Pinilla, Xia Yang

bioRxiv 439562; doi: https://doi.org/10.1101/439562
Metabolic control of YAP via the acto-myosin system during liver regeneration
Kirstin Meyer, Hernan Morales-Navarrete, Sarah Seifert, Michaela Wilsch-Braeuninger, Uta Dahmen, Elly M. Tanaka, Lutz Brusch, Yannis Kalaidzidis, Marino Zerial

bioRxiv 617878; doi: https://doi.org/10.1101/617878
Structure-based validation can drastically under-estimate error rate in proteome-wide cross-linking mass spectrometry studies
Kumar Yugandhar, Ting-Yi Wang, Haiyuan Yu

bioRxiv 617654; doi: https://doi.org/10.1101/617654
Information processing by endoplasmic reticulum stress sensors
Wylie Stroberg, Justin Eilertsen, Santiago Schnell

bioRxiv 617217; doi: https://doi.org/10.1101/617217
Plant-Necrotroph Co-transcriptome Networks Illuminate a Metabolic Battlefield
Wei Zhang, Jason A. Corwin, Daniel Copeland, Julie Feusier, Robert Eshbaugh, David E. Cook, Susana Atwell, Daniel J. Kliebenstein

bioRxiv 485235; doi: https://doi.org/10.1101/485235
Maximum Entropy Framework For Inference Of Cell Population Heterogeneity In Signaling Networks
Purushottam D. Dixit, Eugenia Lyashenko, Mario Niepel, Dennis Vitkup

bioRxiv 137513; doi: https://doi.org/10.1101/137513
Catestatin improves insulin sensitivity in diet-induced obese mice: in vivo and in silico validation
Abhijit Dasgupta, Keya Bandyopadhyay, Indrani Ray, Gautam K. Bandyopadhyay, Nirmalya Chowdhury, Rajat K. De, Sushil K. Mahata

bioRxiv 615997; doi: https://doi.org/10.1101/615997
Multilayered N-glycoproteomics reveals impaired N-glycosylation promoting Alzheimer’s disease
Pan Fang, Juan-Juan Xie, Shao-Ming Sang, Lei Zhang, Ming-Qi Liu, Lu-Jie Yang, Yi-Teng Xu, Guo-Quan Yan, Jun Yao, Xing Gao, Wen-Jing Qian, Zhong-Feng Wang, Yang Zhang, Peng-Yuan Yang, Hua-Li Shen

bioRxiv 615989; doi: https://doi.org/10.1101/615989

Systems Biology

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