Systems Biology

Metabolic reprogramming dynamics in tumor spheroids: Insights from a multicellular, multiscale model
Mahua Roy, Stacey D Finley

bioRxiv 485201; doi: https://doi.org/10.1101/485201 New Results
Enhanced flux prediction by integrating relative expression and relative metabolite abundance into thermodynamically consistent metabolic models
Vikash Pandey, Noushin Hadadi, Vassily Hatzimanikatis

bioRxiv 481499; doi: https://doi.org/10.1101/481499 New Results
The finite state projection based Fisher information matrix approach to estimate information and optimize single-cell experiments
Zachary R Fox, Brian Munsky

bioRxiv 370205; doi: https://doi.org/10.1101/370205 New Results
Blood-based molecular biomarker signatures in Alzheimer's disease: Insights from systems biomedicine perspective
Md. Rezanur Rahman, Tania Islam, Toyfiquz Zaman, Md. Shahjaman, Md. Rezaul Karim, Damian Holsinger, Mohammad Ali Moni

bioRxiv 481879; doi: https://doi.org/10.1101/481879 New Results
Lineage tracing on transcriptional landscapes links state to fate during differentiation
Caleb Weinreb, Alejo E Rodriguez-Fraticelli, Fernando D Camargo, Allon M Klein

bioRxiv 467886; doi: https://doi.org/10.1101/467886 New Results
The value structure of metabolic states
Wolfram Liebermeister

bioRxiv 483891; doi: https://doi.org/10.1101/483891 New Results
QTG-Finder: a machine-learning algorithm to prioritize causal genes of quantitative trait loci in Arabidopsis and rice
Fan Lin, Jue Fan, Seung Y. Rhee

bioRxiv 484204; doi: https://doi.org/10.1101/484204 New Results
Optimal metabolic states in cells
Wolfram Liebermeister

bioRxiv 483867; doi: https://doi.org/10.1101/483867 New Results
Hfq CLASH uncovers sRNA-target interaction networks enhancing adaptation to nutrient availability
Ira A. Iosub, Marta Marchioretto, Brandon Sy, Stuart McKellar, Karen J. Nieken, Rob W. van Nues, Jai J. Tree, Gabriella Viero, Sander Granneman

bioRxiv 481986; doi: https://doi.org/10.1101/481986 New Results
Ergodicity analysis and antithetic integral control of a class of stochastic reaction networks with delays
Corentin Briat, Mustafa Khammash

bioRxiv 481085; doi: https://doi.org/10.1101/481085 New Results

Systems Biology

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