Systems Biology

Environment-independent distribution of mutational effects emerges from microscopic epistasis
Sarah Ardell, Alena Martsul, Milo S. Johnson, Sergey Kryazhimskiy

bioRxiv 2023.11.18.567655; doi: https://doi.org/10.1101/2023.11.18.567655 New Results

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An enzyme activation network provides evidence for extensive regulatory crosstalk between metabolic pathways
Sultana Mohammed Al Zubaidi, Muhammad Ibtisam Nasar, Markus Ralser, Richard A. Notebaart, Mohammad Tauqeer Alam

bioRxiv 2023.11.16.567372; doi: https://doi.org/10.1101/2023.11.16.567372 New Results

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Differential responses of primary neuron-secreted MCP-1 and IL-9 to type 2 diabetes and Alzheimer’s disease-associated metabolites
Brendan K. Ball, Madison K. Kuhn, Rebecca M. Fleeman, Elizabeth A. Proctor, Douglas K. Brubaker

bioRxiv 2023.11.17.567595; doi: https://doi.org/10.1101/2023.11.17.567595 New Results

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Whole-body positive synchronization pattern of metabolic transcriptomes
Ehud Z. Sussman, Dana Mor, Judith Somekh

bioRxiv 2023.11.16.567365; doi: https://doi.org/10.1101/2023.11.16.567365 New Results

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Fine-grained modelling of ATP dependence of decision-making capacity in genetic regulatory networks
Rajneesh Kumar, Iain G. Johnston

bioRxiv 2023.11.16.567352; doi: https://doi.org/10.1101/2023.11.16.567352 New Results

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Active learning for medium optimization for selective bacterial culture
Shuyang Zhang, Honoka Aida, Bei-Wen Ying

bioRxiv 2023.11.15.567258; doi: https://doi.org/10.1101/2023.11.15.567258 New Results

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Extended discrete gene regulatory network model for the Arabidopsis thaliana root-hair cell fate
Aarón Castillo-Jiménez, Adriana Garay-Arroyo, M. de La Paz Sánchez, Berenice García-Ponce, Juan Carlos Martínez-García, Elena R. Álvarez-Buylla

bioRxiv 2023.11.15.567304; doi: https://doi.org/10.1101/2023.11.15.567304 New Results

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Visual interpretability of image-based classification models by generative latent space disentanglement applied to in vitro fertilization
Oded Rotem, Tamar Schwartz, Ron Maor, Yishay Tauber, Maya Tsarfati Shapiro, Marcos Meseguer, Daniella Gilboa, Daniel S. Seidman, Assaf Zaritsky

bioRxiv 2023.11.15.566968; doi: https://doi.org/10.1101/2023.11.15.566968 New Results

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From CFTR to a CF signalling network: a systems biology approach to study Cystic Fibrosis
Matthieu Najm, Loredana Martignetti, Matthieu Cornet, Mairead Kelly-Aubert, Isabelle Sermet, Laurence Calzone, Véronique Stoven

bioRxiv 2023.11.15.567166; doi: https://doi.org/10.1101/2023.11.15.567166 New Results

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Trans-omic analysis reveals opposite metabolic dysregulation between feeding and fasting in liver associated with obesity
Yunfan Bai, Keigo Morita, Toshiya Kokaji, Atsushi Hatano, Satoshi Ohno, Riku Egami, Yifei Pan, Dongzi Li, Katsuyuki Yugi, Saori Uematsu, Hiroshi Inoue, Yuka Inaba, Yutaka Suzuki, Masaki Matsumoto, Masatomo Takahashi, Izumi Yoshihiro, Takeshi Bamba, Akiyoshi Hirayama, Tomoyoshi Soga, Shinya Kuroda

bioRxiv 2023.11.15.567316; doi: https://doi.org/10.1101/2023.11.15.567316 New Results

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Systems Biology

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