Systems Biology

Comment on ‘Initiation of chromosome replication controls both division and replication cycles in E. coli through a double-adder mechanism’
Guillaume Le Treut, Fangwei Si, Dongyang Li, Suckjoon Jun

bioRxiv 2020.05.08.084376; doi: https://doi.org/10.1101/2020.05.08.084376 Contradictory Results

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Systematic auditing is essential to debiasing machine learning in biology
Fatma-Elzahraa Eid, Haitham Elmarakeby, Yujia Alina Chan, Nadine Fornelos Martins, Mahmoud ElHefnawi, Eli Van Allen, Lenwood S. Heath, Kasper Lage

bioRxiv 2020.05.08.085183; doi: https://doi.org/10.1101/2020.05.08.085183 New Results

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A Comparison of ‘Pruning’ During Multi-Step Planning in Depressed and Healthy Individuals
Paul Faulkner, Quentin J.M. Huys, Daniel Renz, Neir Eshel, Stephen Pilling, Peter Dayan, Jonathan P. Roiser

bioRxiv 2020.05.08.084509; doi: https://doi.org/10.1101/2020.05.08.084509 New Results

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Generating Synthetic Signaling Networks for in Silico Modeling Studies
Jin Xu, H. Steven Wiley, Herbert M. Sauro

bioRxiv 2020.05.08.084848; doi: https://doi.org/10.1101/2020.05.08.084848 New Results

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The winning methods for predicting cellular position in the DREAM single cell transcriptomics challenge
Vu VH Pham, Xiaomei Li, Buu Truong, Thin Nguyen, Lin Liu, Jiuyong Li, Thuc D Le

bioRxiv 2020.05.09.086397; doi: https://doi.org/10.1101/2020.05.09.086397 New Results

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Explainable multi-view framework for dissecting inter-cellular signaling from highly multiplexed spatial data
Jovan Tanevski, Attila Gabor, Ricardo Omar Ramirez Flores, Denis Schapiro, Julio Saez-Rodriguez

bioRxiv 2020.05.08.084145; doi: https://doi.org/10.1101/2020.05.08.084145 New Results

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Data-driven learning how oncogenic gene expression locally alters heterocellular networks
David J. Klinke II, Audry Fernandez, Wentao Deng, Anika C. Pirkey

bioRxiv 2020.05.04.077107; doi: https://doi.org/10.1101/2020.05.04.077107 New Results

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SARS-CoV-2 proteins exploit host’s genetic and epigenetic mediators for the annexation of key host signaling pathways that confers its immune evasion and disease pathophysiology
Md. Abdullah-Al-Kamran Khan, Abul Bashar Mir Md. Khademul Islam

bioRxiv 2020.05.06.050260; doi: https://doi.org/10.1101/2020.05.06.050260 New Results

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Proteome-Wide Analysis of ADAR-mediated Messenger RNA Editing During Fruit Fly Ontogeny
Anna A. Kliuchnikova, Anton O. Goncharov, Lev I. Levitsky, Mikhail A. Pyatnitskiy, Svetlana E. Novikova, Ksenia G. Kuznetsova, Mark V. Ivanov, Irina Y. Ilina, Tatyana E. Farafonova, Victor G. Zgoda, Mikhail V. Gorshkov, Sergei A. Moshkovskii

bioRxiv 2020.05.07.082404; doi: https://doi.org/10.1101/2020.05.07.082404 New Results

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Exploiting collateral sensitivity controls growth of mixed culture of sensitive and resistant cells and decreases selection for resistant cells
Vince Kornél Grolmusz, Jinfeng Chen, Rena Emond, Patrick A. Cosgrove, Lance Pflieger, Aritro Nath, Philip J. Moos, Andrea H. Bild

bioRxiv 2020.05.07.082073; doi: https://doi.org/10.1101/2020.05.07.082073 New Results

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Systems Biology

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