Systems Biology

A multiscale computational framework for the development of spines in molluscan shells
Derek E. Moulton, Nathanaël Aubert-Kato, Axel A. Almet, Atsuko Sato

bioRxiv 2023.05.09.539281; doi: https://doi.org/10.1101/2023.05.09.539281 New Results

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Reusable rule-based cell cycle model explains compartment-resolved dynamics of 16 observables in RPE-1 cells
Paul F. Lang, David R. Penas, Julio R. Banga, Daniel Weindl, Bela Novak

bioRxiv 2023.05.04.539349; doi: https://doi.org/10.1101/2023.05.04.539349 New Results

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Hybrid vesicle and reaction-diffusion modeling with STEPS
Iain Hepburn, Jules Lallouette, Weiliang Chen, Andrew R. Gallimore, Sarah Y. Nagasawa, Erik De Schutter

bioRxiv 2023.05.08.539782; doi: https://doi.org/10.1101/2023.05.08.539782 New Results

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Jump-start and push-start: Mutual activation through crosstalk in coupled quorum sensing pathways
Joseph Sanders, Hoda Akl, Stephen J. Hagen, BingKan Xue

bioRxiv 2023.05.08.539885; doi: https://doi.org/10.1101/2023.05.08.539885 New Results

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Personalized Clostridioides difficile engraftment risk prediction and probiotic therapy assessment in the human gut
Alex Carr, Nitin S. Baliga, Christian Diener, Sean M. Gibbons

bioRxiv 2023.04.28.538771; doi: https://doi.org/10.1101/2023.04.28.538771 New Results

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Microbial Interactions from a New Perspective: Reinforcement Learning Reveals New Insights into Microbiome Evolution
Parsa Ghadermazi, Siu Hung Joshua Chan

bioRxiv 2023.05.07.539711; doi: https://doi.org/10.1101/2023.05.07.539711 New Results

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Vitamin D constrains inflammation by modulating the expression of key genes on Chr17q12-21.1
Ayşe Kılıç, Arda Halu, Margherita De Marzio, Enrico Maiorino, Melody G. Duvall, Thayse Brueggemann, Joselyn J. Rojas Quintero, Robert Chase, Hooman Mirzakhani, Ayse Özge Sungur, Janine Koepke, Taiji Nakano, Hong Yong Peh, Nandini Krishnamoorthy, Raja-Elie Abdulnour, Katia Georgopoulos, Augusto A. Litonjua, Marie B. Demay, Harald Renz, Bruce D. Levy, Scott. T Weiss

bioRxiv 2022.05.22.491886; doi: https://doi.org/10.1101/2022.05.22.491886 New Results

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Multi-omic analysis of bat versus human fibroblasts reveals altered central metabolism
N. Suhas Jagannathan, Javier Yu Peng Koh, Younghwan Lee, Radoslaw M Sobota, Aaron Irving, Lin-Fa Wang, Yoko Itahana, Koji Itahana, Lisa Tucker-Kellogg

bioRxiv 2023.05.08.537600; doi: https://doi.org/10.1101/2023.05.08.537600 New Results

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Nitrogen starvation causes lipid remodeling in Rhodotorula toruloides
Shekhar Mishra, Anshu Deewan, Huimin Zhao, Christopher V. Rao

bioRxiv 2023.05.07.539759; doi: https://doi.org/10.1101/2023.05.07.539759 New Results

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Modeling Protein Structure Using Geometric Vector Field Networks*
Weian Mao, Muzhi Zhu, Hao Chen, Chunhua Shen

bioRxiv 2023.05.07.539736; doi: https://doi.org/10.1101/2023.05.07.539736 New Results

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Systems Biology

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