Systems Biology

Bayesian Confidence Intervals for Multiplexed Proteomics Integrate Ion-Statistics with Peptide Quantification Concordance
Leon Peshkin, Meera Gupta, Lillia Ryazanova, Martin Wuhr

bioRxiv 210476; doi: https://doi.org/10.1101/210476 New Results
Genome-wide Prediction of Potential Polycomb Response Elements and their Functions
Morteza Khabiri, Peter L. Freddolino

bioRxiv 516500; doi: https://doi.org/10.1101/516500 New Results
Stem-cell-ubiquitous genes spatiotemporally coordinate division through regulation of stem-cell-specific gene networks
Natalie M Clark, Eli Buckner, Adam P Fisher, Emily C Nelson, Thomas T Nguyen, Abigail R Simmons, Maria A de Luis Balaguer, Tiara Butler-Smith, Parnell J Sheldon, Dominique C Bergmann, Cranos M Williams, Rosangela Sozzani

bioRxiv 517250; doi: https://doi.org/10.1101/517250 New Results
IMCC: Quantitative Analysis of the Inter-module Connectivity for Bio-network
Pengqian Wang, Jun Liu, Yanan Yu, Yingying Zhang, Bing Li, Dongfeng Li, Wenjuan Xu, Qiong Liu, Zhong Wang

bioRxiv 516237; doi: https://doi.org/10.1101/516237 New Results
Evolution of resilience in protein interactomes across the tree of life
Marinka Zitnik, Rok Sosic, Marcus W Feldman, Jure Leskovec

bioRxiv 454033; doi: https://doi.org/10.1101/454033 New Results
Multi-study inference of regulatory networks for more accurate models of gene regulation
Dayanne M. Castro, Nick de Veaux, Emily R. Miraldi, Richard Bonneau

bioRxiv 279224; doi: https://doi.org/10.1101/279224 New Results
A 2.08 Å resolution structure of HLB5, a novel cellulase from the anaerobic gut bacterium Parabacteroides johnsonii DSM 18315.
Changsoo Chang, Charles Brooke, Hailan Piao, Jamey Mack, Gyorgy Babnigg, Andrzej Joachimiak, Matthias Hess

bioRxiv 516542; doi: https://doi.org/10.1101/516542 New Results
Transient Probability Distributions of Gene Regulatory Networks with Slow Promoter Kinetics
Muhammad Ali Al-Radhawi

bioRxiv 514547; doi: https://doi.org/10.1101/514547 New Results
Connectivity of variants in eQTL networks dictates reproducibility and functionality
Sheila Gaynor, Maud Fagny, Xihong Lin, John Platig, John Quackenbush

bioRxiv 515551; doi: https://doi.org/10.1101/515551 New Results
Polymerase recycling contributes to transcriptional noise
Massimo Cavallaro, Mark D. Walsh, Matt Jones, James Teahan, Simone Tiberi, Barbel Finkenstadt, Daniel Hebenstreit

bioRxiv 514174; doi: https://doi.org/10.1101/514174 New Results

Systems Biology

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