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A model of flux regulation in the cholesterol biosynthesis pathway: Immune mediated graduated flux reduction versus statin-like led stepped flux reduction

Steven Watterson, Maria Luisa Guerriero, Mathieu Blanc, Alexander Mazein, Laurence Loewe, Kevin A Robertson, Holly Gibbs, Guanghou Shui, Markus R Wenk, Jane Hillston, Peter Ghazal
doi: https://doi.org/10.1101/000380
Steven Watterson
aDivision of Pathway Medicine, University of Edinburgh Medical, Chancellors Building, 49 Little France Crescent, Edinburgh EH16 4SB, Scotland, United Kingdom
bCentre for Systems Biology at Edinburgh, CH Waddington Building, The King’s Buildings, West Mains Road, Edinburgh, EH9 3JU, Scotland, United Kingdom
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  • For correspondence: s.watterson@ed.ac.uk p.ghazal@ed.ac.uk
Maria Luisa Guerriero
bCentre for Systems Biology at Edinburgh, CH Waddington Building, The King’s Buildings, West Mains Road, Edinburgh, EH9 3JU, Scotland, United Kingdom
cSchool of Informatics, Informatics Forum, 10 Crichton Street, University of Edinburgh, EH8 9AB, Scotland, United Kingdom
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Mathieu Blanc
aDivision of Pathway Medicine, University of Edinburgh Medical, Chancellors Building, 49 Little France Crescent, Edinburgh EH16 4SB, Scotland, United Kingdom
dCentre for Cardiovascular Science, University of Edinburgh, QMRI, 49 Little France Crescent, EH16 4TJ, Scotland, United Kingdom
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Alexander Mazein
aDivision of Pathway Medicine, University of Edinburgh Medical, Chancellors Building, 49 Little France Crescent, Edinburgh EH16 4SB, Scotland, United Kingdom
bCentre for Systems Biology at Edinburgh, CH Waddington Building, The King’s Buildings, West Mains Road, Edinburgh, EH9 3JU, Scotland, United Kingdom
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Laurence Loewe
bCentre for Systems Biology at Edinburgh, CH Waddington Building, The King’s Buildings, West Mains Road, Edinburgh, EH9 3JU, Scotland, United Kingdom
cSchool of Informatics, Informatics Forum, 10 Crichton Street, University of Edinburgh, EH8 9AB, Scotland, United Kingdom
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Kevin A Robertson
aDivision of Pathway Medicine, University of Edinburgh Medical, Chancellors Building, 49 Little France Crescent, Edinburgh EH16 4SB, Scotland, United Kingdom
bCentre for Systems Biology at Edinburgh, CH Waddington Building, The King’s Buildings, West Mains Road, Edinburgh, EH9 3JU, Scotland, United Kingdom
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Holly Gibbs
aDivision of Pathway Medicine, University of Edinburgh Medical, Chancellors Building, 49 Little France Crescent, Edinburgh EH16 4SB, Scotland, United Kingdom
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Guanghou Shui
eDepartment of Biochemistry and Department of Biological Sciences, National University of Singapore, Singapore 117597
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Markus R Wenk
eDepartment of Biochemistry and Department of Biological Sciences, National University of Singapore, Singapore 117597
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Jane Hillston
bCentre for Systems Biology at Edinburgh, CH Waddington Building, The King’s Buildings, West Mains Road, Edinburgh, EH9 3JU, Scotland, United Kingdom
cSchool of Informatics, Informatics Forum, 10 Crichton Street, University of Edinburgh, EH8 9AB, Scotland, United Kingdom
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Peter Ghazal
aDivision of Pathway Medicine, University of Edinburgh Medical, Chancellors Building, 49 Little France Crescent, Edinburgh EH16 4SB, Scotland, United Kingdom
bCentre for Systems Biology at Edinburgh, CH Waddington Building, The King’s Buildings, West Mains Road, Edinburgh, EH9 3JU, Scotland, United Kingdom
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  • For correspondence: s.watterson@ed.ac.uk p.ghazal@ed.ac.uk
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Abstract

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Graphical Abstract

  • We model the cholesterol biosynthesis pathway and its regulation

  • The innate immune response leads to a suppression of flux through the pathway

  • Statin inhibitors show a different mode of suppression to the immune response

  • Statin inhibitor suppression is less robust and less specific than immune suppression

Highlights

Asbtract The cholesterol biosynthesis pathway has recently been shown to play an important role in the innate immune response to viral infection with host protection occurring through a coordinate down regulation of the enzymes catalyzing each metabolic step. In contrast, statin based drugs, which form the principle pharmaceutical agents for decreasing the activity of this pathway, target a single enzyme. Here, we build an ordinary differential equation model of the cholesterol biosynthesis pathway in order to investigate how the two regulatory strategies impact upon the behaviour of the pathway. We employ a modest set of assumptions: that the pathway operates away from saturation, that each metabolite is involved in multiple cellular interactions and that mRNA levels reflect enzyme concentrations. Using data taken from primary bone marrow derived macrophage cells infected with murine cytomegalovirus infection or treated with IFNγ, we show that, under these assumptions, coordinate down regulation of enzyme activity imparts a graduated reduction in flux along the pathway. In contrast, modelling a statin-like treatment that achieves the same degree of down-regulation in cholesterol production, we show that this delivers a step change in flux along the pathway. The graduated reduction mediated by physiological coordinate regulation of multiple enzymes supports a mechanism that allows a greater level of specificity, altering cholesterol levels with less impact upon interactions branching from the pathway, than pharmacological step reductions. We argue that coordinate regulation is likely to show a long-term evolutionary advantage over single enzyme regulation. Finally, the results from our models have implications for future pharmaceutical therapies intended to target cholesterol production with greater specificity and fewer off target effects, suggesting that this can be achieved by mimicking the coordinated down-regulation observed in immunological responses.

Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY Unported 3.0 license.
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Posted November 14, 2013.
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A model of flux regulation in the cholesterol biosynthesis pathway: Immune mediated graduated flux reduction versus statin-like led stepped flux reduction
Steven Watterson, Maria Luisa Guerriero, Mathieu Blanc, Alexander Mazein, Laurence Loewe, Kevin A Robertson, Holly Gibbs, Guanghou Shui, Markus R Wenk, Jane Hillston, Peter Ghazal
bioRxiv 000380; doi: https://doi.org/10.1101/000380
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A model of flux regulation in the cholesterol biosynthesis pathway: Immune mediated graduated flux reduction versus statin-like led stepped flux reduction
Steven Watterson, Maria Luisa Guerriero, Mathieu Blanc, Alexander Mazein, Laurence Loewe, Kevin A Robertson, Holly Gibbs, Guanghou Shui, Markus R Wenk, Jane Hillston, Peter Ghazal
bioRxiv 000380; doi: https://doi.org/10.1101/000380

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