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Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing

Konstantin Berlin, Sergey Koren, Chen-Shan Chin, James Drake, Jane M. Landolin, Adam M. Phillippy
doi: https://doi.org/10.1101/008003
Konstantin Berlin
1Department of Chemistry and Biochemistry, University of Maryland, College Park, MD 20742, USA
2Institute for Advanced Computer Studies, University of Maryland, College Park, MD 20742, USA
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Sergey Koren
3National Biodefense Analysis and Countermeasures Center, Frederick, MD 21702, USA
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  • For correspondence: korens@nbacc.net
Chen-Shan Chin
4Pacific Biosciences, Menlo Park, CA 94025, USA
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James Drake
4Pacific Biosciences, Menlo Park, CA 94025, USA
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Jane M. Landolin
4Pacific Biosciences, Menlo Park, CA 94025, USA
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Adam M. Phillippy
3National Biodefense Analysis and Countermeasures Center, Frederick, MD 21702, USA
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Article Information

doi 
https://doi.org/10.1101/008003
History 
  • August 14, 2014.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.

Author Information

  1. Konstantin Berlin1,2†,
  2. Sergey Koren3†*,
  3. Chen-Shan Chin4,
  4. James Drake4,
  5. Jane M. Landolin4 and
  6. Adam M. Phillippy3
  1. 1Department of Chemistry and Biochemistry, University of Maryland, College Park, MD 20742, USA
  2. 2Institute for Advanced Computer Studies, University of Maryland, College Park, MD 20742, USA
  3. 3National Biodefense Analysis and Countermeasures Center, Frederick, MD 21702, USA
  4. 4Pacific Biosciences, Menlo Park, CA 94025, USA
  1. ↵*Corresponding author: korens{at}nbacc.net
  1. ↵† These authors contributed equally to this work

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Posted August 14, 2014.
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Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing
Konstantin Berlin, Sergey Koren, Chen-Shan Chin, James Drake, Jane M. Landolin, Adam M. Phillippy
bioRxiv 008003; doi: https://doi.org/10.1101/008003
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Assembling Large Genomes with Single-Molecule Sequencing and Locality Sensitive Hashing
Konstantin Berlin, Sergey Koren, Chen-Shan Chin, James Drake, Jane M. Landolin, Adam M. Phillippy
bioRxiv 008003; doi: https://doi.org/10.1101/008003

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