Flexible expressed region analysis for RNA-seq with derfinder

Leonardo Collado-Torres; Abhinav Nellore; Alyssa C. Frazee; Christopher Wilks; Michael I. Love; Ben Langmead; Rafael A. Irizarry; Jeffrey T. Leek; Andrew E. Jaffe

doi:10.1101/015370

New Results

Flexible expressed region analysis for RNA-seq with `derfinder`

Leonardo Collado-Torres, Abhinav Nellore, Alyssa C. Frazee, Christopher Wilks, Michael I. Love, Ben Langmead, Rafael A. Irizarry, Jeffrey T. Leek, Andrew E. Jaffe

doi: https://doi.org/10.1101/015370

Leonardo Collado-Torres

1Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health

2Center for Computational Biology, Johns Hopkins University

3Lieber Institute for Brain Development, Johns Hopkins Medical Campus

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Abhinav Nellore

1Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health

2Center for Computational Biology, Johns Hopkins University

4Department of Computer Science, Johns Hopkins University

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Alyssa C. Frazee

1Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health

2Center for Computational Biology, Johns Hopkins University

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Christopher Wilks

2Center for Computational Biology, Johns Hopkins University

4Department of Computer Science, Johns Hopkins University

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Michael I. Love

5Department of Biostatistics, Harvard T.H. Chan School of Public Health

6Dana-Farber Cancer Institute, Harvard University

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Ben Langmead

1Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health

2Center for Computational Biology, Johns Hopkins University

4Department of Computer Science, Johns Hopkins University

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Rafael A. Irizarry

5Department of Biostatistics, Harvard T.H. Chan School of Public Health

6Dana-Farber Cancer Institute, Harvard University

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Jeffrey T. Leek

1Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health

2Center for Computational Biology, Johns Hopkins University

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
For correspondence: jtleek@gmail.com

Andrew E. Jaffe

1Department of Biostatistics, Johns Hopkins Bloomberg School of Public Health

2Center for Computational Biology, Johns Hopkins University

3Lieber Institute for Brain Development, Johns Hopkins Medical Campus

7Department of Mental Health, Johns Hopkins University

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
For correspondence: andrew.jaffe@libd.org

Abstract
Full Text
Info/History
Metrics
Supplementary material
Preview PDF

HTML Page - index.htslp

Files in this Data Supplement:

Supplementary Figures

View the discussion thread.

PreviousNext

Posted May 19, 2016.

Download PDF

Supplementary Material

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following Flexible expressed region analysis for RNA-seq with derfinder

Message Subject (Your Name) has forwarded a page to you from bioRxiv

Message Body (Your Name) thought you would like to see this page from the bioRxiv website.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

Flexible expressed region analysis for RNA-seq with derfinder

Leonardo Collado-Torres, Abhinav Nellore, Alyssa C. Frazee, Christopher Wilks, Michael I. Love, Ben Langmead, Rafael A. Irizarry, Jeffrey T. Leek, Andrew E. Jaffe

bioRxiv 015370; doi: https://doi.org/10.1101/015370

Share This Article:

Citation Tools

Flexible expressed region analysis for RNA-seq with derfinder

Leonardo Collado-Torres, Abhinav Nellore, Alyssa C. Frazee, Christopher Wilks, Michael I. Love, Ben Langmead, Rafael A. Irizarry, Jeffrey T. Leek, Andrew E. Jaffe

bioRxiv 015370; doi: https://doi.org/10.1101/015370

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

Tweet Widget
Facebook Like
Google Plus One

Subject Area

Bioinformatics

Subject Areas

All Articles

Animal Behavior and Cognition (4380)
Biochemistry (9571)
Bioengineering (7084)
Bioinformatics (24831)
Biophysics (12595)
Cancer Biology (9948)
Cell Biology (14342)
Clinical Trials (138)
Developmental Biology (7943)
Ecology (12095)
Epidemiology (2067)
Evolutionary Biology (15980)
Genetics (10915)
Genomics (14730)
Immunology (9862)
Microbiology (23636)
Molecular Biology (9472)
Neuroscience (50824)
Paleontology (369)
Pathology (1538)
Pharmacology and Toxicology (2678)
Physiology (4009)
Plant Biology (8653)
Scientific Communication and Education (1508)
Synthetic Biology (2389)
Systems Biology (6422)
Zoology (1345)