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Analysis of protein-coding genetic variation in 60,706 humans

Exome Aggregation Consortium, Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O’Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings, Taru Tukiainen, Daniel P Birnbaum, Jack A Kosmicki, Laramie Duncan, Karol Estrada, Fengmei Zhao, James Zou, Emma Pierce-Hoffman, David N Cooper, Mark DePristo, Ron Do, Jason Flannick, Menachem Fromer, Laura Gauthier, Jackie Goldstein, Namrata Gupta, Daniel Howrigan, Adam Kiezun, Mitja I Kurki, Ami Levy Moonshine, Pradeep Natarajan, Lorena Orozco, Gina M Peloso, Ryan Poplin, Manuel A Rivas, Valentin Ruano-Rubio, Douglas M Ruderfer, Khalid Shakir, Peter D Stenson, Christine Stevens, Brett P Thomas, Grace Tiao, Maria T Tusie-Luna, Ben Weisburd, Hong-Hee Won, Dongmei Yu, David M Altshuler, Diego Ardissino, Michael Boehnke, John Danesh, Roberto Elosua, Jose C Florez, Stacey B Gabriel, Gad Getz, Christina M Hultman, Sekar Kathiresan, Markku Laakso, Steven McCarroll, Mark I McCarthy, Dermot McGovern, Ruth McPherson, Benjamin M Neale, Aarno Palotie, Shaun M Purcell, Danish Saleheen, Jeremiah Scharf, Pamela Sklar, Patrick F Sullivan, Jaakko Tuomilehto, Hugh C Watkins, James G Wilson, Mark J Daly, Daniel G MacArthur
doi: https://doi.org/10.1101/030338
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
Monkol Lek
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
3School of Paediatrics and Child Health, University of Sydney, Sydney, NSW, Australia
4Institute for Neuroscience and Muscle Research, Childrens Hospital at Westmead, Sydney, NSW, Australia
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Konrad J Karczewski
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Eric V Minikel
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
5Program in Biological and Biomedical Sciences, Harvard Medical School, Boston, MA, USA
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Kaitlin E Samocha
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
6Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
5Program in Biological and Biomedical Sciences, Harvard Medical School, Boston, MA, USA
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Eric Banks
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Timothy Fennell
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Anne H O’Donnell-Luria
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
7Division of Genetics and Genomics, Boston Children’s Hospital, Boston, MA, USA
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James S Ware
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
8Department of Genetics, Harvard Medical School, Boston, MA, USA
9National Heart and Lung Institute, Imperial College London, London, UK
10NIHR Royal Brompton Cardiovascular Biomedical Research Unit, Royal Brompton Hospital, London, UK
11MRC Clinical Sciences Centre, Imperial College London, London, UK
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Andrew J Hill
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
12Genome Sciences, University of Washington, Seattle, WA, USA
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Beryl B Cummings
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
5Program in Biological and Biomedical Sciences, Harvard Medical School, Boston, MA, USA
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Taru Tukiainen
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Daniel P Birnbaum
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Jack A Kosmicki
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
6Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
13Program in Bioinformatics and Integrative Genomics, Harvard Medical School, Boston, MA, USA
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Laramie Duncan
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Karol Estrada
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Fengmei Zhao
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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James Zou
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Emma Pierce-Hoffman
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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David N Cooper
14Institute of Medical Genetics, Cardiff University, Cardiff, UK
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Mark DePristo
15Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Ron Do
16Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA
17Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY, USA
18The Charles Bronfman Institute for Personalized Medicine, Icahn School of Medicine at Mount Sinai, New York, NY, USA
19The Center for Statistical Genetics, Icahn School of Medicine at Mount Sinai, New York, NY, USA
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Jason Flannick
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
20Department of Molecular Biology, Massachusetts General Hospital, Boston, MA, USA
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Menachem Fromer
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
6Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
21Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA
16Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA
17Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY, USA
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Laura Gauthier
15Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Jackie Goldstein
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
6Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Namrata Gupta
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Daniel Howrigan
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
6Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Adam Kiezun
15Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Mitja I Kurki
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
22Psychiatric and Neurodevelopmental Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
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Ami Levy Moonshine
15Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Pradeep Natarajan
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
23Harvard Medical School, Boston, MA, USA
24Center for Human Genetic Research, Massachusetts General Hospital, Boston, MA, USA
25Cardiovascular Research Center, Massachusetts General Hospital, Boston, MA, USA
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Lorena Orozco
26Immunogenomics and Metabolic Disease Laboratory, Instituto Nacional de Medicina Genomica, Mexico City, Mexico
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Gina M Peloso
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
24Center for Human Genetic Research, Massachusetts General Hospital, Boston, MA, USA
25Cardiovascular Research Center, Massachusetts General Hospital, Boston, MA, USA
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Ryan Poplin
15Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Manuel A Rivas
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Valentin Ruano-Rubio
15Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Douglas M Ruderfer
21Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA
16Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA
17Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY, USA
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Khalid Shakir
15Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Peter D Stenson
14Institute of Medical Genetics, Cardiff University, Cardiff, UK
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Christine Stevens
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Brett P Thomas
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Grace Tiao
15Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Maria T Tusie-Luna
27Department of Endocrinology and Metabolism, Instituto Nacional de Ciencias Medicas y Nutricion, Mexico City, Mexico
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Ben Weisburd
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Hong-Hee Won
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
23Harvard Medical School, Boston, MA, USA
24Center for Human Genetic Research, Massachusetts General Hospital, Boston, MA, USA
25Cardiovascular Research Center, Massachusetts General Hospital, Boston, MA, USA
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Dongmei Yu
22Psychiatric and Neurodevelopmental Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
28Department of Neurology, Brigham and Women’s Hospital, Boston, MA, USA
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David M Altshuler
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
29Vertex Pharmaceuticals, Boston, MA, USA
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Diego Ardissino
30Department of Cardiology, University Hospital, Parma, Italy
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Michael Boehnke
31Department of Biostatistics and Center for Statistical Genetics, University of Michigan, Ann Arbor, MI, USA
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John Danesh
32Department of Public Health and Primary Care, Strangeways Research Laboratory, Cambridge, UK
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Roberto Elosua
33Cardiovascular Epidemiology and Genetics, Hospital del Mar Medical Research Institute, Barcelona, Spain
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Jose C Florez
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
23Harvard Medical School, Boston, MA, USA
24Center for Human Genetic Research, Massachusetts General Hospital, Boston, MA, USA
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Stacey B Gabriel
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Gad Getz
15Broad Institute of MIT and Harvard, Cambridge, MA, USA
23Harvard Medical School, Boston, MA, USA
34Department of Pathology and Cancer Center, Massachusetts General Hospital, Boston, MA, USA
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Christina M Hultman
35Department of Medical Epidemiology and Biostatistics, Karolinska Institute, Stockholm, Sweden
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Sekar Kathiresan
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
23Harvard Medical School, Boston, MA, USA
24Center for Human Genetic Research, Massachusetts General Hospital, Boston, MA, USA
25Cardiovascular Research Center, Massachusetts General Hospital, Boston, MA, USA
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Markku Laakso
36Department of Medicine, University of Eastern Finland and Kuopio University Hospital, Kuopio, Finland
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Steven McCarroll
6Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
8Department of Genetics, Harvard Medical School, Boston, MA, USA
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Mark I McCarthy
37Wellcome Trust Centre for Human Genetics, University of Oxford, Oxford, UK
38Oxford Centre for Diabetes,Endocrinology and Metabolism, University of Oxford, Oxford, UK
39Oxford NIHR Biomedical Research Centre, Oxford University Hospitals Foundation Trust, Oxford, UK
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Dermot McGovern
40Inflammatory Bowel Disease and Immunobiology Research Institute, Cedars-Sinai Medical Center, Los Angeles, CA, USA
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Ruth McPherson
41Atherogenomics Laboratory, University of Ottawa Heart Institute, Ottawa, ON, Canada
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Benjamin M Neale
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
6Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Aarno Palotie
42Institute for Molecular Medicine Finland (FIMM), University of Helsinki, Helsinki, Finland
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Shaun M Purcell
21Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA
16Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA
17Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY, USA
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Danish Saleheen
43Department of Biostatistics and Epidemiology, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA, USA
44Department of Medicine, Perelman School of Medicine at the University of Pennsylvania, Philadelphia, PA, USA
45Center for Non-Communicable Diseases, Karachi, Pakistan
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Jeremiah Scharf
22Psychiatric and Neurodevelopmental Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
28Department of Neurology, Brigham and Women’s Hospital, Boston, MA, USA
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Pamela Sklar
21Department of Psychiatry, Icahn School of Medicine at Mount Sinai, New York, NY, USA
16Department of Genetics and Genomic Sciences, Icahn School of Medicine at Mount Sinai, New York, NY, USA
17Institute for Genomics and Multiscale Biology, Icahn School of Medicine at Mount Sinai, New York, NY, USA
46Friedman Brain Institute, Icahn School of Medicine at Mount Sinai, New York, NY, USA
47Department of Neuroscience, Icahn School of Medicine at Mount Sinai, New York, NY, USA
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Patrick F Sullivan
48Department of Genetics, University of North Carolina, Chapel Hill, NC, USA
49Department of Medical Epidemiology and Biostatistics, Karolinska Institutet, Stockholm, Sweden
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Jaakko Tuomilehto
50Department of Public Health, University of Helsinki, Helsinki, Finland
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Hugh C Watkins
51Radcliffe Department of Medicine, University of Oxford, Oxford, UK
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James G Wilson
52Department of Physiology and Biophysics, University of Mississippi Medical Center, Jackson, MS, USA
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Mark J Daly
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
6Stanley Center for Psychiatric Research, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Daniel G MacArthur
1Analytic and Translational Genetics Unit, Massachusetts General Hospital, Boston, MA, USA
2Program in Medical and Population Genetics, Broad Institute of MIT and Harvard, Cambridge, MA, USA
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Analysis of protein-coding genetic variation in 60,706 humans
Exome Aggregation Consortium, Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O’Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings, Taru Tukiainen, Daniel P Birnbaum, Jack A Kosmicki, Laramie Duncan, Karol Estrada, Fengmei Zhao, James Zou, Emma Pierce-Hoffman, David N Cooper, Mark DePristo, Ron Do, Jason Flannick, Menachem Fromer, Laura Gauthier, Jackie Goldstein, Namrata Gupta, Daniel Howrigan, Adam Kiezun, Mitja I Kurki, Ami Levy Moonshine, Pradeep Natarajan, Lorena Orozco, Gina M Peloso, Ryan Poplin, Manuel A Rivas, Valentin Ruano-Rubio, Douglas M Ruderfer, Khalid Shakir, Peter D Stenson, Christine Stevens, Brett P Thomas, Grace Tiao, Maria T Tusie-Luna, Ben Weisburd, Hong-Hee Won, Dongmei Yu, David M Altshuler, Diego Ardissino, Michael Boehnke, John Danesh, Roberto Elosua, Jose C Florez, Stacey B Gabriel, Gad Getz, Christina M Hultman, Sekar Kathiresan, Markku Laakso, Steven McCarroll, Mark I McCarthy, Dermot McGovern, Ruth McPherson, Benjamin M Neale, Aarno Palotie, Shaun M Purcell, Danish Saleheen, Jeremiah Scharf, Pamela Sklar, Patrick F Sullivan, Jaakko Tuomilehto, Hugh C Watkins, James G Wilson, Mark J Daly, Daniel G MacArthur
bioRxiv 030338; doi: https://doi.org/10.1101/030338
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Analysis of protein-coding genetic variation in 60,706 humans
Exome Aggregation Consortium, Monkol Lek, Konrad J Karczewski, Eric V Minikel, Kaitlin E Samocha, Eric Banks, Timothy Fennell, Anne H O’Donnell-Luria, James S Ware, Andrew J Hill, Beryl B Cummings, Taru Tukiainen, Daniel P Birnbaum, Jack A Kosmicki, Laramie Duncan, Karol Estrada, Fengmei Zhao, James Zou, Emma Pierce-Hoffman, David N Cooper, Mark DePristo, Ron Do, Jason Flannick, Menachem Fromer, Laura Gauthier, Jackie Goldstein, Namrata Gupta, Daniel Howrigan, Adam Kiezun, Mitja I Kurki, Ami Levy Moonshine, Pradeep Natarajan, Lorena Orozco, Gina M Peloso, Ryan Poplin, Manuel A Rivas, Valentin Ruano-Rubio, Douglas M Ruderfer, Khalid Shakir, Peter D Stenson, Christine Stevens, Brett P Thomas, Grace Tiao, Maria T Tusie-Luna, Ben Weisburd, Hong-Hee Won, Dongmei Yu, David M Altshuler, Diego Ardissino, Michael Boehnke, John Danesh, Roberto Elosua, Jose C Florez, Stacey B Gabriel, Gad Getz, Christina M Hultman, Sekar Kathiresan, Markku Laakso, Steven McCarroll, Mark I McCarthy, Dermot McGovern, Ruth McPherson, Benjamin M Neale, Aarno Palotie, Shaun M Purcell, Danish Saleheen, Jeremiah Scharf, Pamela Sklar, Patrick F Sullivan, Jaakko Tuomilehto, Hugh C Watkins, James G Wilson, Mark J Daly, Daniel G MacArthur
bioRxiv 030338; doi: https://doi.org/10.1101/030338

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