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MAGELLAN: a tool to explore small fitness landscapes

S Brouillet, H Annoni, L Ferretti, G Achaz
doi: https://doi.org/10.1101/031583
S Brouillet
1UMR7138 Evolution Paris-Seine, UPMC Univ Paris 06, Paris
2Atelier de Bio-Informatique, UPMC Univ Paris 06, Paris
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H Annoni
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L Ferretti
1UMR7138 Evolution Paris-Seine, UPMC Univ Paris 06, Paris
2Atelier de Bio-Informatique, UPMC Univ Paris 06, Paris
3Equipe SMILE, CIRB, CNRS UMR7241 - INSERM U1050, College de France, Paris
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G Achaz
1UMR7138 Evolution Paris-Seine, UPMC Univ Paris 06, Paris
2Atelier de Bio-Informatique, UPMC Univ Paris 06, Paris
3Equipe SMILE, CIRB, CNRS UMR7241 - INSERM U1050, College de France, Paris
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  • For correspondence: guillaume.achaz@upmc.fr
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1 ABSTRACT

In a fitness landscape, fitness values are associated to all genotypes corresponding to several, potentially all, combinations of a set of mutations. In the last decade, many small experimental fitness landscapes have been partially or completely resolved, and more will likely follow. MAGELLAN is a web-based graphical software to explore small fitness/energy landscapes through dynamic visualization and quantitative measures. It can be used to explore input custom landscapes, previously published experimental landscapes or randomly generated model landscapes.

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Posted November 13, 2015.
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MAGELLAN: a tool to explore small fitness landscapes
S Brouillet, H Annoni, L Ferretti, G Achaz
bioRxiv 031583; doi: https://doi.org/10.1101/031583
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MAGELLAN: a tool to explore small fitness landscapes
S Brouillet, H Annoni, L Ferretti, G Achaz
bioRxiv 031583; doi: https://doi.org/10.1101/031583

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