Neptune: A Bioinformatics Tool for Rapid Discovery of Genomic Variation in Bacterial Populations

Eric Marinier; Rahat Zaheer; Chrystal Berry; Kelly Weedmark; Michael Domaratzki; Philip Mabon; Natalie Knox; Aleisha Reimer; Morag Graham; Linda Chui; The Canadian Listeria Detection and Surveillance using Next Generation Genomics (LiDS-NG) Consortium; Gary Van Domselaar

doi:10.1101/032227

New Results

Neptune: A Bioinformatics Tool for Rapid Discovery of Genomic Variation in Bacterial Populations

Eric Marinier, Rahat Zaheer, Chrystal Berry, Kelly Weedmark, Michael Domaratzki, Philip Mabon, Natalie Knox, Aleisha Reimer, Morag Graham, Linda Chui, The Canadian Listeria Detection and Surveillance using Next Generation Genomics (LiDS-NG) Consortium, Gary Van Domselaar

doi: https://doi.org/10.1101/032227

Eric Marinier

1National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Rahat Zaheer

1National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Chrystal Berry

1National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Kelly Weedmark

1National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Michael Domaratzki

2Department of Computer Science, University of Manitoba, Winnipeg, MB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Philip Mabon

1National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Natalie Knox

1National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Aleisha Reimer

1National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Morag Graham

1National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

3Department of Medical Microbiology and Infectious Diseases, University of Manitoba, Winnipeg, MB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Linda Chui

4Provincial Laboratory for Public Health, Edmonton, AB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site

Gary Van Domselaar

1National Microbiology Laboratory, Public Health Agency of Canada, Winnipeg, MB, Canada

3Department of Medical Microbiology and Infectious Diseases, University of Manitoba, Winnipeg, MB, Canada

Find this author on Google Scholar
Find this author on PubMed
Search for this author on this site
For correspondence: gary.vandomselaar@canada.ca

Abstract
Full Text
Info/History
Metrics
Supplementary material
Preview PDF

HTML Page - index.htslp

Supplementary

Supplementary Table - L. mono 1/2a Signatures
Supplementary Table - L. mono 4b Signatures
Supplementary Table - E. coli STEC Signatures
Supplementary Materials

HTML Page - index.htslp

Supplementary

View the discussion thread.

PreviousNext

Posted November 30, 2016.

Download PDF

Supplementary Material

Thank you for your interest in spreading the word about bioRxiv.

NOTE: Your email address is requested solely to identify you as the sender of this article.

Your Email *

Your Name *

Send To *

Enter multiple addresses on separate lines or separate them with commas.

You are going to email the following Neptune: A Bioinformatics Tool for Rapid Discovery of Genomic Variation in Bacterial Populations

Message Subject (Your Name) has forwarded a page to you from bioRxiv

Message Body (Your Name) thought you would like to see this page from the bioRxiv website.

Your Personal Message

CAPTCHA

This question is for testing whether or not you are a human visitor and to prevent automated spam submissions.

Neptune: A Bioinformatics Tool for Rapid Discovery of Genomic Variation in Bacterial Populations

bioRxiv 032227; doi: https://doi.org/10.1101/032227

Share This Article:

Citation Tools

Neptune: A Bioinformatics Tool for Rapid Discovery of Genomic Variation in Bacterial Populations

bioRxiv 032227; doi: https://doi.org/10.1101/032227

Citation Manager Formats

BibTeX
Bookends
EasyBib
EndNote (tagged)
EndNote 8 (xml)
Medlars
Mendeley
Papers
RefWorks Tagged
Ref Manager
RIS
Zotero

Tweet Widget
Facebook Like
Google Plus One

Subject Area

Bioinformatics

Subject Areas

All Articles

Animal Behavior and Cognition (5700)
Biochemistry (12913)
Bioengineering (9806)
Bioinformatics (31501)
Biophysics (16239)
Cancer Biology (13315)
Cell Biology (18999)
Clinical Trials (138)
Developmental Biology (10296)
Ecology (15301)
Epidemiology (2067)
Evolutionary Biology (19530)
Genetics (12962)
Genomics (17913)
Immunology (13029)
Microbiology (30460)
Molecular Biology (12703)
Neuroscience (66450)
Paleontology (489)
Pathology (2055)
Pharmacology and Toxicology (3545)
Physiology (5521)
Plant Biology (11385)
Scientific Communication and Education (1750)
Synthetic Biology (3160)
Systems Biology (7825)
Zoology (1766)