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Human mismatch repair system corrects errors produced during lagging strand replication more effectively

Maria A. Andrianova, Georgii A. Bazykin, Sergey I. Nikolaev, Vladimir B. Seplyarskiy
doi: https://doi.org/10.1101/045278
Maria A. Andrianova
1Institute for Information Transmission Problems of the Russian Academy of Sciences (Kharkevich Institute), Bolshoi Karetny pereulok 19, Moscow 127994, Russia
2Moscow State University, Leninskie gory 1, Moscow 119234, Russia
3Pirogov Russian National Research Medical University, Ostrovitianov str. 1, Moscow 117997, Russia
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  • For correspondence: baranova.mariia@gmail.com (alicodendrochit@gmail.com)
Georgii A. Bazykin
1Institute for Information Transmission Problems of the Russian Academy of Sciences (Kharkevich Institute), Bolshoi Karetny pereulok 19, Moscow 127994, Russia
2Moscow State University, Leninskie gory 1, Moscow 119234, Russia
3Pirogov Russian National Research Medical University, Ostrovitianov str. 1, Moscow 117997, Russia
4Skolkovo Institute of Science and Technology, Skolkovo 143026, Russia
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Sergey I. Nikolaev
5Department of Genetic Medicine and Development, University of Geneva Medical School, 1 Rue Michel-Servet, 1211 Geneva, Switzerland; Institute of Genetics and Genomics in Geneva, 1211 Geneva, Switzerland
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Vladimir B. Seplyarskiy
1Institute for Information Transmission Problems of the Russian Academy of Sciences (Kharkevich Institute), Bolshoi Karetny pereulok 19, Moscow 127994, Russia
3Pirogov Russian National Research Medical University, Ostrovitianov str. 1, Moscow 117997, Russia
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  • For correspondence: baranova.mariia@gmail.com (alicodendrochit@gmail.com)
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Abstract

Mismatch repair (MMR) is one of the main systems maintaining fidelity of replication. Different effectiveness in correction of errors produced during replication of the leading and the lagging DNA strands was reported in yeast, but this effect is poorly studied in humans. Here, we use MMR-deficient (MSI) and MMR-proficient (MSS) cancer samples to investigate properties of the human MMR. MSI, but not MSS, cancers demonstrate unequal mutation rates between the leading and the lagging strands. The direction of strand asymmetry in MSI cancers matches that observed in cancers with mutated exonuclease domain of polymerase δ, indicating that polymerase δ contributes more mutations than its leading-strand counterpart, polymerase ε. As polymerase δ primarily synthesizes DNA during the lagging strand replication, this implies that mutations produced in wild type cells during lagging strand replication are repaired by the MMR ~3 times more effectively, compared to those produced on the leading strand.

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Posted March 23, 2016.
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Human mismatch repair system corrects errors produced during lagging strand replication more effectively
Maria A. Andrianova, Georgii A. Bazykin, Sergey I. Nikolaev, Vladimir B. Seplyarskiy
bioRxiv 045278; doi: https://doi.org/10.1101/045278
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Human mismatch repair system corrects errors produced during lagging strand replication more effectively
Maria A. Andrianova, Georgii A. Bazykin, Sergey I. Nikolaev, Vladimir B. Seplyarskiy
bioRxiv 045278; doi: https://doi.org/10.1101/045278

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