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Gender identification in Chicken (Gallus gallus) by PCR using whole blood and dried blood spot on filter paper as template: without prior DNA isolation

S. Dhanasekaran, G. Dhinakar Raj, A. R. Vignesh, S. T. Selvan, B. Prakash, P. Perumal, Seenichamy Arivudainambi, Thambidurai Ganesh Babu
doi: https://doi.org/10.1101/046888
S. Dhanasekaran
1Department of Animal Biotechnology, Madras Veterinary College, Chennai - 600007, Tamil Nadu, India
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G. Dhinakar Raj
1Department of Animal Biotechnology, Madras Veterinary College, Chennai - 600007, Tamil Nadu, India
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  • For correspondence: dhinakarrajg@tanuvas.org.in
A. R. Vignesh
1Department of Animal Biotechnology, Madras Veterinary College, Chennai - 600007, Tamil Nadu, India
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S. T. Selvan
2Post Graduate Research Institute in Animal Sciences, Kattupakkam, Kancheepuram - 603203, Tamil Nadu, India
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B. Prakash
3Department of Biotechnology, Periyar University, Salem - 636011, Tamil Nadu, India
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P. Perumal
3Department of Biotechnology, Periyar University, Salem - 636011, Tamil Nadu, India
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Seenichamy Arivudainambi
4Al Awsaj Medical Equipment, Doha, Qatar
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Thambidurai Ganesh Babu
4Al Awsaj Medical Equipment, Doha, Qatar
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  • For correspondence: babu@awsaj.com
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Abstract

Accurate sex identification of pure line chickens in their early age has significant economic impact in breeding industry. In the recent years, range of Polymerase Chain Reaction (PCR) based sex determination techniques are routinely used to identify the sex of parent lines in breeding industries, however purified DNA is a prerequisite. Hence this study was aimed to develop a rapid and inexpensive PCR based gender identification method for chicken using whole blood samples and dried blood spots as template for PCR without DNA extraction. In addition, practicability of two W-chromosome specific gene targets in chicken for sex determination also characterised. Successful amplification of sex specific fragments and an internal control was achieved with the range of 0.125μl and 0.250μl volume of whole blood on filter paper (~1 mm) prepared from chicken and dried blood spot. This technique does not require DNA extraction, freeze/thawing of blood samples, pre-treatment with any reagents, dilution of whole blood or dried blood spots on filter paper. It can be carried out with commercially available Taq polymerase enzymes with increased concentration of MgCl2 (3 mM) and 0.5% of DMSO without optimisation of PCR buffers. In conclusion, as compared to the existing PCR based sex identification techniques, the present approach is relatively economic, time saving, requires minimal steps and eliminates the need for DNA extraction.

Footnotes

  • Abbreviations DBS, Dried blood spots; PCR, Polymerase chain reaction; DNA, Deoxyribonucleic acid (DNA); CHD, Chromodomain helicase DNA binding protein; WB-PCR, Whole blood – Polymerase chain reaction.

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The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY-NC-ND 4.0 International license.
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Posted April 03, 2016.
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Gender identification in Chicken (Gallus gallus) by PCR using whole blood and dried blood spot on filter paper as template: without prior DNA isolation
S. Dhanasekaran, G. Dhinakar Raj, A. R. Vignesh, S. T. Selvan, B. Prakash, P. Perumal, Seenichamy Arivudainambi, Thambidurai Ganesh Babu
bioRxiv 046888; doi: https://doi.org/10.1101/046888
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Gender identification in Chicken (Gallus gallus) by PCR using whole blood and dried blood spot on filter paper as template: without prior DNA isolation
S. Dhanasekaran, G. Dhinakar Raj, A. R. Vignesh, S. T. Selvan, B. Prakash, P. Perumal, Seenichamy Arivudainambi, Thambidurai Ganesh Babu
bioRxiv 046888; doi: https://doi.org/10.1101/046888

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