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Wild-type U2AF1 antagonizes the splicing program characteristic of U2AF1-mutant tumors and is required for cell survival

Dennis Liang Fei, Hayley Motowski, Rakesh Chatrikhi, Sameer Prasad, Jovian Yu, Shaojian Gao, Clara Kielkopf, Robert K. Bradley, Harold Varmus
doi: https://doi.org/10.1101/048553
Dennis Liang Fei
1Cancer Biology Section, Cancer Genetics Branch, National Human Genome Research Institute, Bethesda, MD 20892, United States
2Department of Medicine, Meyer Cancer Center, Weill Cornell Medicine, New York, NY 10065, United States
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  • For correspondence: dlf2002@med.cornell.edu clara_kielkopf@urmc.rochester.edu rbradley@fredhutch.org varmus@med.cornell.edu
Hayley Motowski
1Cancer Biology Section, Cancer Genetics Branch, National Human Genome Research Institute, Bethesda, MD 20892, United States
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Rakesh Chatrikhi
3Department of Biochemistry and Biophysics, Center for RNA Biology, University of Rochester Medical Center, Rochester, NY 14642, United States
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Sameer Prasad
1Cancer Biology Section, Cancer Genetics Branch, National Human Genome Research Institute, Bethesda, MD 20892, United States
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Jovian Yu
1Cancer Biology Section, Cancer Genetics Branch, National Human Genome Research Institute, Bethesda, MD 20892, United States
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Shaojian Gao
4Genetics Branch, National Cancer Institute, Bethesda, Maryland, 20892, United States
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Clara Kielkopf
3Department of Biochemistry and Biophysics, Center for RNA Biology, University of Rochester Medical Center, Rochester, NY 14642, United States
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  • For correspondence: dlf2002@med.cornell.edu clara_kielkopf@urmc.rochester.edu rbradley@fredhutch.org varmus@med.cornell.edu
Robert K. Bradley
5Computational Biology Program, Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, United States
6Basic Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, United States
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  • For correspondence: dlf2002@med.cornell.edu clara_kielkopf@urmc.rochester.edu rbradley@fredhutch.org varmus@med.cornell.edu
Harold Varmus
1Cancer Biology Section, Cancer Genetics Branch, National Human Genome Research Institute, Bethesda, MD 20892, United States
2Department of Medicine, Meyer Cancer Center, Weill Cornell Medicine, New York, NY 10065, United States
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  • For correspondence: dlf2002@med.cornell.edu clara_kielkopf@urmc.rochester.edu rbradley@fredhutch.org varmus@med.cornell.edu
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Article Information

doi 
https://doi.org/10.1101/048553
History 
  • August 24, 2016.

Article Versions

  • Version 1 (April 13, 2016 - 21:57).
  • Version 2 (April 16, 2016 - 16:55).
  • Version 3 (April 20, 2016 - 15:20).
  • Version 4 (May 20, 2016 - 10:48).
  • You are viewing Version 5, the most recent version of this article.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.

Author Information

  1. Dennis Liang Fei1,2,*,
  2. Hayley Motowski1,
  3. Rakesh Chatrikhi3,
  4. Sameer Prasad1,
  5. Jovian Yu1,
  6. Shaojian Gao4,
  7. Clara Kielkopf3,*,
  8. Robert K. Bradley5,6,* and
  9. Harold Varmus1,2,*
  1. 1Cancer Biology Section, Cancer Genetics Branch, National Human Genome Research Institute, Bethesda, MD 20892, United States
  2. 2Department of Medicine, Meyer Cancer Center, Weill Cornell Medicine, New York, NY 10065, United States
  3. 3Department of Biochemistry and Biophysics, Center for RNA Biology, University of Rochester Medical Center, Rochester, NY 14642, United States
  4. 4Genetics Branch, National Cancer Institute, Bethesda, Maryland, 20892, United States
  5. 5Computational Biology Program, Public Health Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, WA 98109, United States
  6. 6Basic Sciences Division, Fred Hutchinson Cancer Research Center, Seattle, Washington 98109, United States
  1. ↵*Correspondence: D.L.F. dlf2002{at}med.cornell.edu; C.L.K. clara_kielkopf{at}urmc.rochester.edu; R.K.B. rbradley{at}fredhutch.org; H.V. varmus{at}med.cornell.edu
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Wild-type U2AF1 antagonizes the splicing program characteristic of U2AF1-mutant tumors and is required for cell survival
Dennis Liang Fei, Hayley Motowski, Rakesh Chatrikhi, Sameer Prasad, Jovian Yu, Shaojian Gao, Clara Kielkopf, Robert K. Bradley, Harold Varmus
bioRxiv 048553; doi: https://doi.org/10.1101/048553
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Wild-type U2AF1 antagonizes the splicing program characteristic of U2AF1-mutant tumors and is required for cell survival
Dennis Liang Fei, Hayley Motowski, Rakesh Chatrikhi, Sameer Prasad, Jovian Yu, Shaojian Gao, Clara Kielkopf, Robert K. Bradley, Harold Varmus
bioRxiv 048553; doi: https://doi.org/10.1101/048553

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