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k-BOOM: A Bayesian approach to ontology structure inference, with applications in disease ontology construction

View ORCID ProfileChristopher J. Mungall, Sebastian Koehler, Peter Robinson, Ian Holmes, View ORCID ProfileMelissa Haendel
doi: https://doi.org/10.1101/048843
Christopher J. Mungall
1Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, MS977, 1 Cyclotron Road, Berkeley, CA 94720 USA
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  • ORCID record for Christopher J. Mungall
Sebastian Koehler
2Institute for Medical and Human Genetics, Charite-Universitatsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
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Peter Robinson
2Institute for Medical and Human Genetics, Charite-Universitatsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
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Ian Holmes
3Department of Bioengineering, University of California, Berkeley, CA, USA
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Melissa Haendel
4Department of Medical Informatics & Clinical Epidemiology, Oregon Health and Sciences University, Portland, Oregon, USA
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  • ORCID record for Melissa Haendel
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Article Information

doi 
https://doi.org/10.1101/048843
History 
  • January 29, 2019.

Article Versions

  • Version 1 (April 15, 2016 - 03:01).
  • Version 2 (May 18, 2016 - 06:48).
  • You are viewing Version 3, the most recent version of this article.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. It is made available under a CC-BY 4.0 International license.

Author Information

  1. Christopher J. Mungall1,*,
  2. Sebastian Koehler2,
  3. Peter Robinson2,
  4. Ian Holmes3 and
  5. Melissa Haendel4
  1. 1Environmental Genomics and Systems Biology Division, Lawrence Berkeley National Laboratory, MS977, 1 Cyclotron Road, Berkeley, CA 94720 USA
  2. 2Institute for Medical and Human Genetics, Charite-Universitatsmedizin Berlin, Augustenburger Platz 1, 13353 Berlin, Germany
  3. 3Department of Bioengineering, University of California, Berkeley, CA, USA
  4. 4Department of Medical Informatics & Clinical Epidemiology, Oregon Health and Sciences University, Portland, Oregon, USA
  1. ↵*to whom correspondence should be addressed
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Posted January 29, 2019.
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k-BOOM: A Bayesian approach to ontology structure inference, with applications in disease ontology construction
Christopher J. Mungall, Sebastian Koehler, Peter Robinson, Ian Holmes, Melissa Haendel
bioRxiv 048843; doi: https://doi.org/10.1101/048843
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k-BOOM: A Bayesian approach to ontology structure inference, with applications in disease ontology construction
Christopher J. Mungall, Sebastian Koehler, Peter Robinson, Ian Holmes, Melissa Haendel
bioRxiv 048843; doi: https://doi.org/10.1101/048843

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