- Canidae_traceLogs.pdf -- Trace plots of key variables for all 40 analyses.
- Canidae_treeLogs.pdf -- Plots of the MCC trees for all 40 analyses.
- Ground_truth_vs_estimated_node_ages.pdf -- Plots showing the correlation between the ground truth and estimated node ages.
- Canidae_ground_truth.newick -- The ground-truth tree
- Table_S1_TipDate_runs_v3.xlsx -- Excel version of Supplemental Table S1
- Table_S2_TipDate_runs_v3.xlsx -- Summary of all 40 variant analyses, contains Supplemental Table S2
- Backup links for SuppData zipfile
- Canidae_ground_truth.newick ? The ?ground-truth? tree, derived from digitization of the phylogenies of Canidae published in the monographs of Wang and
- Canidae_traceLogs.pdf -- Trace plots of key variables for all 40 analyses.
- Canidae_treeLogs.pdf -- Plots of the MCC trees for all 40 analyses.
- Ground_truth_vs_estimated_node_ages.pdf -- Linear regressions showing the correlation between the ground truth and estimated node ages, for nodes shar
- Table_S1_TipDate_runs_v3.xlsx - Excel version of Supplemental Table S1
- Table_S2_TipDate_runs_v3.xlsx ? Summary of all 40 variant analyses (contains Supplemental Table S2, and some associated notes and file locations)
- Locations for the large SuppData zipfile
- Supplemental Material: Methods, Results, Figures, Tables
- Appendix 1: Issues in Slater (2015) MrBayes analysis
- Supplemental Table S2
- Location of large supplemental data zipfiles
- Trace plots of key variables for all 60 analyses
- Plots of the MCC trees for all 60 analyses
- Expert vs. estimated node ages
- Expert Canidae tree (newick format)
Posted August 02, 2016.
Inferring node dates from tip dates in fossil Canidae: the importance of tree priors
