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DeepCyTOF: Automated Cell Classification of Mass Cytometry Data by Deep Learning and Domain Adaptation

Huamin Li, Uri Shaham, Yi Yao, Ruth Montgomery, Yuval Kluger
doi: https://doi.org/10.1101/054411
Huamin Li
1Applied Mathematics Program, Yale University, 51 Prospect St., New Haven, CT 06511, USA
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Uri Shaham
2Department of Statistics, Yale University, 24 Hillhouse Ave., New Haven, CT 06511, USA
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Yi Yao
3Department of Internal Medicine, Yale School of Medicine, 333 Cedar St., New Haven, CT 06520, USA
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Ruth Montgomery
3Department of Internal Medicine, Yale School of Medicine, 333 Cedar St., New Haven, CT 06520, USA
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Yuval Kluger
1Applied Mathematics Program, Yale University, 51 Prospect St., New Haven, CT 06511, USA
4Department of Pathology and Yale Cancer Center, Yale University School of Medicine, New Haven, CT, USA
5Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA
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  • For correspondence: yuval.kluger@yale.edu
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Article Information

doi 
https://doi.org/10.1101/054411
History 
  • May 20, 2016.

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  • You are currently viewing Version 1 of this article (May 20, 2016 - 09:20).
  • Version 2 (May 31, 2016 - 10:25).
  • Version 3 (June 14, 2016 - 09:25).
  • Version 4 (March 27, 2017 - 20:05).
  • View Version 5, the most recent version of this article.
Copyright 
The copyright holder for this preprint is the author/funder, who has granted bioRxiv a license to display the preprint in perpetuity. All rights reserved. No reuse allowed without permission.

Author Information

  1. Huamin Li1#,
  2. Uri Shaham2#,
  3. Yi Yao3,
  4. Ruth Montgomery3 and
  5. Yuval Kluger1,4,5,†
  1. 1Applied Mathematics Program, Yale University, 51 Prospect St., New Haven, CT 06511, USA
  2. 2Department of Statistics, Yale University, 24 Hillhouse Ave., New Haven, CT 06511, USA
  3. 3Department of Internal Medicine, Yale School of Medicine, 333 Cedar St., New Haven, CT 06520, USA
  4. 4Department of Pathology and Yale Cancer Center, Yale University School of Medicine, New Haven, CT, USA
  5. 5Interdepartmental Program in Computational Biology and Bioinformatics, Yale University, New Haven, CT, USA
  1. ↵†To whom correspondence should be addressed. Tel: 203-737-6262; Email: yuval.kluger{at}yale.edu
  1. ↵# The first two authors contributed equally to this work

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Posted May 20, 2016.
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DeepCyTOF: Automated Cell Classification of Mass Cytometry Data by Deep Learning and Domain Adaptation
Huamin Li, Uri Shaham, Yi Yao, Ruth Montgomery, Yuval Kluger
bioRxiv 054411; doi: https://doi.org/10.1101/054411
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DeepCyTOF: Automated Cell Classification of Mass Cytometry Data by Deep Learning and Domain Adaptation
Huamin Li, Uri Shaham, Yi Yao, Ruth Montgomery, Yuval Kluger
bioRxiv 054411; doi: https://doi.org/10.1101/054411

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